RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 LLGL1Q15334 1064 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 LIFRP42702 1097 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 NTRK3Q16288 839 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 SPATA4Q8NEY3 305 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 EPB41L4AQ9HCS5 686 aaPredicted RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 CPDO75976 1380 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 CLTAP09496 248 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 NR1D1P20393 614 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 HLFQ16534 295 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 FAM217BQ9NTX9 383 aaPredicted RBP13.06□□□□□ -0.32
CDH5-208ENST00000614547 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 PXDNQ92626 1479 aa13.06□□□□□ -0.32
CDH5-208ENST00000614547 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 MDM2Q00987 491 aaPredicted RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 MAP2K1Q02750 393 aaPredicted RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 CCDC25Q86WR0 208 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 TSG101Q99816 390 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 KIF11P52732 1056 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 EPHB4P54760 987 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 TCP11Q8WWU5 503 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 AP1M1Q9BXS5 423 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 STIM2Q9P246 746 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 PCDHA13Q9Y5I0 950 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 WNT7AO00755 349 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 EIF3HO15372 352 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH5-208ENST00000614547 PPP1R12BO60237 982 aaPredicted RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 CIAO1O76071 339 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 IFNAR2P48551 515 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
CDH5-208ENST00000614547 HERVK_113P62684 666 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 CABP7Q86V35 215 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 LPIN2Q92539 896 aa13.05□□□□□ -0.32
CDH5-208ENST00000614547 BICDL2A1A5D9 508 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 LGALS16A8MUM7 142 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 KIF5BP33176 963 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 TSGA10Q9BZW7 698 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 GOLPH3Q9H4A6 298 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 GSG1L2A8MUP6 293 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 FCER1AP12319 257 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 CTSWP56202 376 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 CAVIN4Q5BKX8 364 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 ZNF444Q8N0Y2 327 aaPredicted RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 KIAA0753Q2KHM9 967 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 MARCH10Q8NA82 808 aaPredicted RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 ZIM3Q96PE6 472 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 OSBPL9Q96SU4 736 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 RBM12Q9NTZ6 932 aaKnown RBP13.04□□□□□ -0.32
CDH5-208ENST00000614547 XDHP47989 1333 aa13.04□□□□□ -0.32
CDH5-208ENST00000614547 KCNQ2O43526 872 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 SCG2P13521 617 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 TCP1P17987 556 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 POLR2FP61218 127 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 AMPD3Q01432 767 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 RPAINQ86UA6 219 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 RNPC3Q96LT9 517 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 PYM1Q9BRP8 204 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 RNF26Q9BY78 433 aaPredicted RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 FOXP2O15409 715 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 KRT13P13646 458 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 TNNC1P63316 161 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 ZBED6P86452 979 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 DDB1Q16531 1140 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 DNAAF5Q86Y56 855 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 DZIP1Q86YF9 867 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 ARFGAP2Q8N6H7 521 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 NUP58Q9BVL2 599 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 TFCP2L1Q9NZI6 479 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 TMOD1P28289 359 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
CDH5-208ENST00000614547 BLIDQ8IZY5 108 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
CDH5-208ENST00000614547 C1orf167Q5SNV9 1468 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
CDH5-208ENST00000614547 NCAPD2Q15021 1401 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms