RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PIP4K2CQ8TBX8 421 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 FNBP1Q96RU3 617 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 EPB41L5Q9HCM4 733 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 SLC5A4Q9NY91 659 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ZNF219Q9P2Y4 722 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 CCNL1Q9UK58 526 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 MLH3Q9UHC1 1453 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 SART1O43290 800 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 GSPT1P15170 499 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 GJC1P36383 396 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 SF3A3Q12874 501 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PDCLQ13371 301 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ZC3H18Q86VM9 953 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 CARD14Q9BXL6 1004 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 NSFL1CQ9UNZ2 370 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 KDM5CP41229 1560 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PASKQ96RG2 1323 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ATP10DQ9P241 1426 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ANKRD65E5RJM6 399 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ZNF449Q6P9G9 518 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 RRAGAQ7L523 313 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 HACE1Q8IYU2 909 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 NRBF2Q96F24 287 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ZNF274Q96GC6 653 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 VPS37BQ9H9H4 285 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PA2G4Q9UQ80 394 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 TARSL2A2RTX5 802 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 H0YIN7 160 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 UFL1O94874 794 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 TBC1D8O95759 1140 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PDE6CP51160 858 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 MRPS35P82673 323 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ADCY2Q08462 1091 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 C11orf57Q6ZUT1 292 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 MAP7D3Q8IWC1 876 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 OTUD7AQ8TE49 926 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 CALR3Q96L12 384 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 KRT12Q99456 494 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 GPR108Q9NPR9 543 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 RTEL1Q9NZ71 1219 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 NCKAP5LQ9HCH0 1330 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 GNPATO15228 680 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 THAP12O43422 761 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 LMNB1P20700 586 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 HNRNPH1P31943 449 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 VPS41P49754 854 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 NBPF20Q3BBV1 942 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 TEKT1Q969V4 418 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PBKQ96KB5 322 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 USP28Q96RU2 1077 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 MOV10L1Q9BXT6 1211 aaKnown RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 PACSIN2Q9UNF0 486 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-211ENST00000613795 EFCAB6Q5THR3 1501 aa7.5□□□□□ -1.21
CLCN3-211ENST00000613795 N4BP1O75113 896 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 ANXA1P04083 346 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 P4HA1P13674 534 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 ATP2B4P23634 1241 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 GGCXP38435 758 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 KIF11P52732 1056 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 MRPS9P82933 396 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 TNFAIP1Q13829 316 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 CWF19L2Q2TBE0 894 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 TMTC3Q6ZXV5 915 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 NLRX1Q86UT6 975 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 ATP8A2Q9NTI2 1148 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 EPS15L1Q9UBC2 864 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 MAN1A2O60476 641 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 APOEP02649 317 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 TTC38Q5R3I4 469 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 SPATA5Q8NB90 893 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 BPIFA3Q9BQP9 254 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 PCDHA7Q9UN72 937 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 PFKFB2O60825 505 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 SNUPNO95149 360 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 CASP14P31944 242 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 PPP1R2P3Q6NXS1 205 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 TTLL7Q6ZT98 887 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 ARHGEF25Q86VW2 580 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 SUGP1Q8IWZ8 645 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 DIS3L2Q8IYB7 885 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 LZICQ8WZA0 190 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 BTG4Q9NY30 223 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 NOVA2Q9UNW9 492 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 hCG_1984214I3L0E3 225 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 SPAG7O75391 227 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 BCRP11274 1271 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 HSPA6P17066 643 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 IFNAR2P48551 515 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 COPB1P53618 953 aaKnown RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 DCAF17Q5H9S7 520 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-211ENST00000613795 KRT40Q6A162 431 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 OTUD6AQ7L8S5 288 aa7.49□□□□□ -1.21
CLCN3-211ENST00000613795 ZNF713Q8N859 430 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms