RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 CDKL5O76039 1030 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 ERLIN2O94905 339 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 CDC27P30260 824 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 PBX1P40424 430 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 POTEDQ86YR6 584 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 SLC35F6Q8N357 371 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 ZBED3Q96IU2 234 aaPredicted RBP24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 CTAGE1Q96RT6 745 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 RRAGCQ9HB90 399 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 ITIH6Q6UXX5 1313 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 GSG1L2A8MUP6 293 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 GNAT2P19087 354 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 TCP10Q12799 353 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 POSTNQ15063 836 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 KANK3Q6NY19 840 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 MTMR14Q8NCE2 650 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 RPGRIP1Q96KN7 1286 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 TACO1Q9BSH4 297 aaKnown RBP24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 EPB41L4AQ9HCS5 686 aaPredicted RBP24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 DDX4Q9NQI0 724 aaKnown RBP24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 ADARB2Q9NS39 739 aaKnown RBP24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 TOMM22Q9NS69 142 aa24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 ZNF70Q9UC06 446 aaPredicted RBP24.59■■□□□ 1.53
POLR2J3-220ENST00000613744 TCP10L2B9ZVM9 353 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 MFAP3LO75121 409 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 EPHX2P34913 555 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 TDO2P48775 406 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 PLCD1P51178 756 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 TMTC1Q8IUR5 882 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 MICALL1Q8N3F8 863 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 ATXN2Q99700 1313 aaKnown RBP24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 CCDC196A0A1B0GTZ2 297 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 PPFIA3O75145 1194 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 PLCG2P16885 1265 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 AMPD2Q01433 879 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 FMR1Q06787 632 aaKnown RBP eCLIP24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 PTPN21Q16825 1174 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 WWC2Q6AWC2 1192 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 MB21D2Q8IYB1 491 aaPredicted RBP24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 IFNL3Q8IZI9 196 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 NAPBQ9H115 298 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 SAP30BPQ9UHR5 308 aaKnown RBP24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 HPCAL4Q9UM19 191 aa24.58■■□□□ 1.53
POLR2J3-220ENST00000613744 PRC1O43663 620 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 USP14P54578 494 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 IMMTQ16891 758 aaKnown RBP24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 EAPPQ56P03 285 aaPredicted RBP24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 CHST3Q7LGC8 479 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 MYO6Q9UM54 1294 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 CLGNO14967 610 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 PHACTR2O75167 634 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 ZFPM1Q8IX07 1006 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 IGSF22Q8N9C0 903 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 KRI1Q8N9T8 703 aaKnown RBP24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 NACAP1Q9BZK3 213 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 NMRK2Q9NPI5 230 aa24.57■■□□□ 1.52
POLR2J3-220ENST00000613744 A6NNZ2 444 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 EVX2Q03828 476 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 TUBB8Q3ZCM7 444 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 SPDYE2Q495Y8 402 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 GBP6Q6ZN66 633 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 TAF1DQ9H5J8 278 aaPredicted RBP24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 DCP1AQ9NPI6 582 aaPredicted RBP24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 ZMYM6O95789 1325 aa24.56■■□□□ 1.52
POLR2J3-220ENST00000613744 EBAG9O00559 213 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 KIF1CO43896 1103 aaKnown RBP24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 RBL2Q08999 1139 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 ANGEL2Q5VTE6 544 aaKnown RBP24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 COG1Q8WTW3 980 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 ALG1Q9BT22 464 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 CDK5RAP2Q96SN8 1893 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 FLT1P17948 1338 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 CYP2D7A0A087X1C5 515 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 SMIM22K7EJ46 135 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 ZNF213O14771 459 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 FILIP1LQ4L180 1135 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 APTXQ7Z2E3 356 aaKnown RBP24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 STK11IPQ8N1F8 1099 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 NCOA7Q8NI08 942 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 CXorf56Q9H5V9 222 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 FAM198AQ9UFP1 575 aa24.55■■□□□ 1.52
POLR2J3-220ENST00000613744 BAZ2AQ9UIF9 1905 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 ECM29Q5VYK3 1845 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 IQCA1LA6NCM1 817 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 KRT40Q6A162 431 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 CPLX2Q6PUV4 134 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 MCM9Q9NXL9 1143 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 GGA3Q9NZ52 723 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 TMOD2Q9NZR1 351 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 CCDC172P0C7W6 258 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 POTEIP0CG38 1075 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 POTEJP0CG39 1038 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 STIM1Q13586 685 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 SPATA1Q5VX52 437 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 ZNF579Q8NAF0 562 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 ANKRD20A12PQ8NF67 263 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 FAM76AQ8TAV0 307 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 SPATA20Q8TB22 786 aa24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 A1CFQ9NQ94 594 aaKnown RBP24.54■■□□□ 1.52
POLR2J3-220ENST00000613744 WDR90Q96KV7 1748 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms