RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 Q9H521 79 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 PA2G4Q9UQ80 394 aaKnown RBP13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 EHBP1L1Q8N3D4 1523 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 NDUFAB1O14561 156 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 GPC4O75487 556 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 GNA14O95837 355 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 SFMBT2Q5VUG0 894 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 MFSD14CQ5VZR4 134 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 KAZNQ674X7 775 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 SCN4BQ8IWT1 228 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 EXT2Q93063 718 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 ARHGAP42A6NI28 874 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 GSTA4O15217 222 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 DNAJC8O75937 253 aaPredicted RBP13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 PIK3CAP42336 1068 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 CDKL2Q92772 493 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 CCDC124Q96CT7 223 aaKnown RBP13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 SPDL1Q96EA4 605 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 TEKT2Q9UIF3 430 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
SLC6A6-204ENST00000613060 RNF8O76064 485 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PPP1R14AQ96A00 147 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 LRGUKQ96M69 825 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 MEIS3Q99687 375 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 MAGEA1P43355 309 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PAK2Q13177 524 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 EXOC8Q8IYI6 725 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 NDUFAF2Q8N183 169 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.313e-16■■■□□ 16.3
SLC6A6-204ENST00000613060 RAB17Q9H0T7 212 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PDE8AO60658 829 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 POLA2Q14181 598 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 RNF10Q8N5U6 811 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 ZFYVE19Q96K21 471 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 KDM3AQ9Y4C1 1321 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 GNGT2O14610 69 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 ITGA6P23229 1130 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 NKX1-1Q15270 411 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PPHLN1Q8NEY8 458 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 MAPK8IP1Q9UQF2 711 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 PRDM1O75626 825 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 IFNB1P01574 187 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 IDI1Q13907 227 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 BEND3Q5T5X7 828 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 TRPC5Q9UL62 973 aaPredicted RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 MRPL11Q9Y3B7 192 aaKnown RBP13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 BPIFB4P59827 614 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 MMEL1Q495T6 779 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 KLHL7Q8IXQ5 586 aa13.13□□□□□ -0.31
SLC6A6-204ENST00000613060 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 EVCP57679 992 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 RWDD4Q6NW29 188 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 SLC38A10Q9HBR0 1119 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 ZNF215Q9UL58 517 aaPredicted RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 MXD4Q14582 209 aaPredicted RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 B4E1Z4 1266 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 STX1BP61266 288 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 CCDC84Q86UT8 332 aaPredicted RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 GLYCTKQ8IVS8 523 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 MAP7D3Q8IWC1 876 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 STX2P32856 288 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 RPGRIP1Q96KN7 1286 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 MX2P20592 715 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 E4F1Q66K89 784 aaPredicted RBP13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 POTEDQ86YR6 584 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 DBNDD1Q9H9R9 158 aa13.12□□□□□ -0.31
SLC6A6-204ENST00000613060 A0A1B0GVL5 298 aa13.11□□□□□ -0.31
SLC6A6-204ENST00000613060 ZNF157P51786 506 aaPredicted RBP13.11□□□□□ -0.31
SLC6A6-204ENST00000613060 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
SLC6A6-204ENST00000613060 ANKRD44Q8N8A2 993 aa13.11□□□□□ -0.31
SLC6A6-204ENST00000613060 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms