RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TBCCQ15814 346 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 KMT5BQ4FZB7 885 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ATP6V1G3Q96LB4 118 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 NT5C3AQ9H0P0 336 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PAG1Q9NWQ8 432 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 MYH8P13535 1937 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 LRIG3Q6UXM1 1119 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 TEKT2Q9UIF3 430 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 TPCN1Q9ULQ1 816 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ZMYND8Q9ULU4 1186 aaPredicted RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 GMEB1Q9Y692 573 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 GOLGA8CPA6NN73 597 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 B4DLN1 442 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PLCG2P16885 1265 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 MRPL12P52815 198 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 KLC3Q6P597 504 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 CHMP6Q96FZ7 201 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 DIAPH2O60879 1101 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 S100BP04271 92 aaPredicted RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 EEF1B2P24534 225 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 ATICP31939 592 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ADCY8P40145 1251 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 STX1BP61266 288 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PDE1BQ01064 536 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 GALNT17Q6IS24 598 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 PFDN6O15212 129 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 SKOR1P84550 965 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ABTB2Q8N961 1025 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ZNF711Q9Y462 761 aa9.54□□□□□ -0.88
TTC28-208ENST00000612946 ATXN2Q99700 1313 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 HNRNPLLQ8WVV9 542 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 METTL14Q9HCE5 456 aaKnown RBP9.54□□□□□ -0.88
TTC28-208ENST00000612946 LAD1O00515 517 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 ESRRAP11474 423 aaPredicted RBP9.53□□□□□ -0.88
TTC28-208ENST00000612946 NAPAP54920 295 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 CCDC15Q0P6D6 951 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 GRAMD1BQ3KR37 738 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 ARHGAP22Q7Z5H3 698 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 PODXLO00592 558 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 STAT2P52630 851 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 DYDC2Q96IM9 177 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 TEX13AQ9BXU3 409 aaPredicted RBP9.53□□□□□ -0.88
TTC28-208ENST00000612946 TUBA4AP68366 448 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 NDUFA5Q16718 116 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 SH3BP5O60239 455 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 GADD45BO75293 160 aaPredicted RBP9.53□□□□□ -0.88
TTC28-208ENST00000612946 RSAD2Q8WXG1 361 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 CSRNP1Q96S65 589 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 SYBUQ9NX95 663 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 DKK3Q9UBP4 350 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 SBNO2Q9Y2G9 1366 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
TTC28-208ENST00000612946 MPP6Q9NZW5 540 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 ZRANB2O95218 330 aaKnown RBP eCLIP9.53□□□□□ -0.88
TTC28-208ENST00000612946 OR9Q1Q8NGQ5 310 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 TRIM31Q9BZY9 425 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 RTEL1Q9NZ71 1219 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 ANKRD12Q6UB98 2062 aa9.53□□□□□ -0.88
TTC28-208ENST00000612946 TSPY2A6NKD2 308 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 ZNF839A8K0R7 811 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 LRMPQ12912 555 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 ABCF3Q9NUQ8 709 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 H0Y626 953 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 DKC1O60832 514 aaKnown RBP eCLIP9.52□□□□□ -0.88
TTC28-208ENST00000612946 TRIM16O95361 564 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 STAT1P42224 750 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 CFAP70Q5T0N1 1121 aa9.52□□□□□ -0.88
TTC28-208ENST00000612946 DHTKD1Q96HY7 919 aaPredicted RBP9.52□□□□□ -0.88
TTC28-208ENST00000612946 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 KCTD16Q68DU8 428 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 JADE1Q6IE81 842 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 CCDC125Q86Z20 511 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 CROCCP3Q8IVE0 287 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 FAM8A1Q9UBU6 413 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 ZFP69BQ9UJL9 534 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 MAST1Q9Y2H9 1570 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 XPOTO43592 962 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 SEC31AO94979 1220 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 NSFP46459 744 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 SYT2Q8N9I0 419 aaPredicted RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 NVLO15381 856 aaKnown RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 DCAF17Q5H9S7 520 aaPredicted RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 COG1Q8WTW3 980 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 GSTA1P08263 222 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
TTC28-208ENST00000612946 USP33Q8TEY7 942 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 LAMC1P11047 1609 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 PPIP5K2O43314 1243 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 SEC24BO95487 1268 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 INHBAP08476 426 aa9.52□□□□□ -0.89
TTC28-208ENST00000612946 SGSM3Q96HU1 749 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms