RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 CABP7Q86V35 215 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 TEX2Q8IWB9 1127 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 TRMT44Q8IYL2 757 aaKnown RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 IGSF22Q8N9C0 903 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 KCNQ5Q9NR82 932 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 SAMSN1Q9NSI8 373 aaKnown RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 LRRC10BA6NIK2 292 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 GCFC2P16383 781 aaKnown RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 CHRNA5P30532 468 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 CEP135Q66GS9 1140 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 KLHL10Q6JEL2 608 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 CALML4Q96GE6 196 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 MTMR9Q96QG7 549 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 DNAJC18Q9H819 358 aa13.47□□□□□ -0.25
USP6NL-206ENST00000609853 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
USP6NL-206ENST00000609853 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
USP6NL-206ENST00000609853 H7C1D1 291 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 ARHGAP6O43182 974 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 SLC26A4O43511 780 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 RHOBTB3O94955 611 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 CASP1P29466 404 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.25
USP6NL-206ENST00000609853 CALCRLQ16602 461 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 AOC3Q16853 763 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 ZSCAN29Q8IWY8 852 aaPredicted RBP13.46□□□□□ -0.25
USP6NL-206ENST00000609853 ZFPM1Q8IX07 1006 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 GMCL1P1Q8NEA9 526 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 COA7Q96BR5 231 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 MAP7D2Q96T17 732 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 PSMD1Q99460 953 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
USP6NL-206ENST00000609853 TMEM232C9JQI7 657 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 STX10O60499 249 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 CDC25AP30304 524 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 SLC1A4P43007 532 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 ATP2B2Q01814 1243 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 E4F1Q66K89 784 aaPredicted RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 STAMQ92783 540 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 GMCL1Q96IK5 515 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 LRRC27Q9C0I9 530 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 TMOD2Q9NZR1 351 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 STK17AQ9UEE5 414 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 ADD3Q9UEY8 706 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 LIMA1Q9UHB6 759 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 HERC5Q9UII4 1024 aaKnown RBP13.45□□□□□ -0.26
USP6NL-206ENST00000609853 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 ITIH6Q6UXX5 1313 aa13.45□□□□□ -0.26
USP6NL-206ENST00000609853 ZSCAN12O43309 604 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 PLCG1P19174 1290 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 ICA1Q05084 483 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TCP10Q12799 353 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 SLFN13Q68D06 897 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 SH3BP5LQ7L8J4 393 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 ADSSL1Q8N142 457 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 GIMAP8Q8ND71 665 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 NOC3LQ8WTT2 800 aaKnown RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 PSTPIP2Q9H939 334 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 PP2D1A8MPX8 630 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 RIOK3O14730 519 aaKnown RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 PSMA7O14818 248 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TECP42680 631 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 EN1Q05925 392 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TRAF1Q13077 416 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 SYCP1Q15431 976 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TTBK2Q6IQ55 1244 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 KIF18AQ8NI77 898 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 SLC16A10Q8TF71 515 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 PANX2Q96RD6 677 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 NAA15Q9BXJ9 866 aaKnown RBP13.44□□□□□ -0.26
USP6NL-206ENST00000609853 TMEM260Q9NX78 707 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 LRWD1Q9UFC0 647 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 HDAC9Q9UKV0 1011 aa13.44□□□□□ -0.26
USP6NL-206ENST00000609853 USP27XA6NNY8 438 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 KLRC4O43908 158 aa13.43□□□□□ -0.26
USP6NL-206ENST00000609853 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
USP6NL-206ENST00000609853 TPM1P09493 284 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms