RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 ASCC2Q9H1I8 757 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-221ENST00000608903 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 TLL2Q9Y6L7 1015 aa13.26□□□□□ -0.29
CTCFL-221ENST00000608903 MEIS2O14770 477 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 CALML3P27482 149 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 JAKMIP3Q5VZ66 844 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 PPP1R18Q6NYC8 613 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 BRAPQ7Z569 592 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 CLEC4DQ8WXI8 215 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 BTBD7Q9P203 1132 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 ZNF214Q9UL59 606 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 FAM155AB1AL88 458 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 BTBD19C9JJ37 291 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 CNMDO75829 334 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 ZNF157P51786 506 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 ADCY7P51828 1080 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 GALNT17Q6IS24 598 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 RGMBQ6NW40 437 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 PIK3AP1Q6ZUJ8 805 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
CTCFL-221ENST00000608903 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 C6orf50Q9HD87 102 aa13.25□□□□□ -0.29
CTCFL-221ENST00000608903 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 CCL15-CCL14A0A0B4J2E2 113 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-221ENST00000608903 CCL15Q16663 113 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 FASTKD5Q7L8L6 764 aaKnown RBP13.24□□□□□ -0.29
CTCFL-221ENST00000608903 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-221ENST00000608903 ZIC5Q96T25 663 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 LMBRD1Q9NUN5 540 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 NFIBO00712 420 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 ZBED4O75132 1171 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 GTF2A2P52657 109 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 GNL2Q13823 731 aaKnown RBP13.24□□□□□ -0.29
CTCFL-221ENST00000608903 LBX2Q6XYB7 198 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 TXNRD2Q9NNW7 524 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
CTCFL-221ENST00000608903 MYPNQ86TC9 1320 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 TMEM88BA6NKF7 163 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 FIBPO43427 364 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-221ENST00000608903 CYP2C8P10632 490 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 CETPP11597 493 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
CTCFL-221ENST00000608903 GNA11P29992 359 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 HOXA13P31271 388 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-221ENST00000608903 PTPAQ15257 358 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 LEO1Q8WVC0 666 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-221ENST00000608903 RBPJLQ9UBG7 517 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
CTCFL-221ENST00000608903 FSD2A1L4K1 749 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 TESPA1A2RU30 521 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ATP2A1O14983 1001 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 SLC10A3P09131 477 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ALAS1P13196 640 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ATP2B1P20020 1258 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 HERVK_113P62684 666 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 FSTL1Q12841 308 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 INF2Q27J81 1249 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 Q3C1V9 767 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 REXO1Q8N1G1 1221 aaKnown RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 CUL5Q93034 780 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 RCOR1Q9UKL0 485 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ABCB11O95342 1321 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 GOLGA6L22H0YM25 854 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 PDHXO00330 501 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 KRT85P78386 507 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ANO1Q5XXA6 986 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 COL20A1Q9P218 1284 aa13.22□□□□□ -0.29
CTCFL-221ENST00000608903 ABT1Q9ULW3 272 aaKnown RBP13.22□□□□□ -0.29
CTCFL-221ENST00000608903 MYH7BA7E2Y1 1941 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 IGF2BP3O00425 579 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 FDX1P10109 184 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 PTMSP20962 102 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 ANKRD23Q86SG2 305 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 ZNF396Q96N95 335 aaPredicted RBP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 TRERF1Q96PN7 1200 aa13.21□□□□□ -0.29
CTCFL-221ENST00000608903 MRPL11Q9Y3B7 192 aaKnown RBP13.21□□□□□ -0.29
CTCFL-221ENST00000608903 CFBP00751 764 aa13.21□□□□□ -0.3
CTCFL-221ENST00000608903 STAT3P40763 770 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms