RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 KRT85P78386 507 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 RILPL1Q5EBL4 403 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 RGMBQ6NW40 437 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 ANKRD23Q86SG2 305 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 CUL5Q93034 780 aa18.92■□□□□ 0.62
PMF1-206ENST00000606952 MRPL11Q9Y3B7 192 aaKnown RBP18.92■□□□□ 0.62
PMF1-206ENST00000606952 TMEM88BA6NKF7 163 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 SLC10A3P09131 477 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 MCM4P33991 863 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 NASPP49321 788 aaPredicted RBP18.91■□□□□ 0.62
PMF1-206ENST00000606952 GNL2Q13823 731 aaKnown RBP18.91■□□□□ 0.62
PMF1-206ENST00000606952 TKFCQ3LXA3 575 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 FAM173BQ6P4H8 233 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 KRT25Q7Z3Z0 450 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
PMF1-206ENST00000606952 GTF3C2Q8WUA4 911 aaPredicted RBP18.91■□□□□ 0.62
PMF1-206ENST00000606952 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 POLR3EQ9NVU0 708 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 CFAP45Q9UL16 551 aa18.91■□□□□ 0.62
PMF1-206ENST00000606952 AP3B2Q13367 1082 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 EARS2Q5JPH6 523 aaKnown RBP18.9■□□□□ 0.62
PMF1-206ENST00000606952 CCDC174Q6PII3 467 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 POTEEQ6S8J3 1075 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 BRI3BPQ8WY22 251 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 USP28Q96RU2 1077 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 SCAND2PQ9GZW5 306 aaPredicted RBP18.9■□□□□ 0.62
PMF1-206ENST00000606952 ASCC2Q9H1I8 757 aaPredicted RBP18.9■□□□□ 0.62
PMF1-206ENST00000606952 ZCCHC17Q9NP64 241 aaKnown RBP18.9■□□□□ 0.62
PMF1-206ENST00000606952 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
PMF1-206ENST00000606952 RTEL1Q9NZ71 1219 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 CCPG1Q9ULG6 757 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 ELP1O95163 1332 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
PMF1-206ENST00000606952 CCL15-CCL14A0A0B4J2E2 113 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 DDX11L8A8MPP1 907 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 MEIS2O14770 477 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 YEATS4O95619 227 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 OSBPP22059 807 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 TOB1P50616 345 aaPredicted RBP18.89■□□□□ 0.61
PMF1-206ENST00000606952 IRX3P78415 501 aaPredicted RBP18.89■□□□□ 0.61
PMF1-206ENST00000606952 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 CCL15Q16663 113 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 USH1GQ495M9 461 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.89■□□□□ 0.61
PMF1-206ENST00000606952 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 CHAMP1Q96JM3 812 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 AGBL1Q96MI9 1066 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 TEX13BQ9BXU2 312 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 PNMA3Q9UL41 463 aa18.89■□□□□ 0.61
PMF1-206ENST00000606952 MANSC4A6NHS7 340 aaPredicted RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 FAM155AB1AL88 458 aaPredicted RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 PTMSP20962 102 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 HERVK_113P62684 666 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 NFKBIBQ15653 356 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 CSPP1Q1MSJ5 1256 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 RAVER2Q9HCJ3 691 aaKnown RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 RCOR1Q9UKL0 485 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 NOL7Q9UMY1 257 aaKnown RBP18.88■□□□□ 0.61
PMF1-206ENST00000606952 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
PMF1-206ENST00000606952 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 FAM205CA6NFA0 338 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 GOLGA6L22H0YM25 854 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 FOSP01100 380 aaPredicted RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 HSD17B4P51659 736 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 ZNF157P51786 506 aaPredicted RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 ORC2Q13416 577 aaPredicted RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 NONOQ15233 471 aaKnown RBP eCLIP18.87■□□□□ 0.61
PMF1-206ENST00000606952 NOM1Q5C9Z4 860 aaKnown RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 RASGRP4Q8TDF6 673 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 CCDC102AQ96A19 550 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 RABGAP1Q9Y3P9 1069 aa18.87■□□□□ 0.61
PMF1-206ENST00000606952 CTDP1Q9Y5B0 961 aaPredicted RBP18.87■□□□□ 0.61
PMF1-206ENST00000606952 CNMDO75829 334 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 BMP15O95972 392 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 COPB2P35606 906 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 PTPAQ15257 358 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 PIK3AP1Q6ZUJ8 805 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 MCF2L2Q86YR7 1114 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 RIOX2Q8IUF8 465 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 LINC00301Q8NCQ3 95 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 LEO1Q8WVC0 666 aaPredicted RBP18.86■□□□□ 0.61
PMF1-206ENST00000606952 CRYGNQ8WXF5 182 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 LCTP09848 1927 aa18.86■□□□□ 0.61
PMF1-206ENST00000606952 FRMPD4Q14CM0 1322 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 TAL1P17542 331 aaPredicted RBP18.85■□□□□ 0.61
PMF1-206ENST00000606952 STAT3P40763 770 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 INHBEP58166 350 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 UBE2SQ16763 222 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 FOXD4L6Q3SYB3 417 aaPredicted RBP18.85■□□□□ 0.61
PMF1-206ENST00000606952 SNRNP48Q6IEG0 339 aaKnown RBP18.85■□□□□ 0.61
PMF1-206ENST00000606952 USP17L6PQ6QN14 398 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 FOXD4L3Q6VB84 417 aaPredicted RBP18.85■□□□□ 0.61
PMF1-206ENST00000606952 CPXCR1Q8N123 301 aa18.85■□□□□ 0.61
PMF1-206ENST00000606952 PTPN18Q99952 460 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms