RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MUM1L1Q5H9M0 696 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 CCDC174Q6PII3 467 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
CTSA-213ENST00000606782 ANKRD33Q7Z3H0 272 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 MORC4Q8TE76 937 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ANKS1AQ92625 1134 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ESR2Q92731 530 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 TRIM43Q96BQ3 446 aaPredicted RBP15.69■□□□□ 0.1
CTSA-213ENST00000606782 DIAPH3Q9NSV4 1193 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 PNMA2Q9UL42 364 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 CCPG1Q9ULG6 757 aa15.69■□□□□ 0.1
CTSA-213ENST00000606782 ELP1O95163 1332 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 CTAGE5O15320 804 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 SNAP25P60880 206 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 ZNF543Q08ER8 600 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
CTSA-213ENST00000606782 KCNA10Q16322 511 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 CCDC178Q5BJE1 867 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 PCSK9Q8NBP7 692 aaKnown RBP15.68■□□□□ 0.1
CTSA-213ENST00000606782 CHMP4CQ96CF2 233 aa15.68■□□□□ 0.1
CTSA-213ENST00000606782 MYADML2A6NDP7 307 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 SLC16A2P36021 539 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 CDK7P50613 346 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 SPC25Q9HBM1 224 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 CTNNA3Q9UI47 895 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 GNEQ9Y223 722 aaKnown RBP15.67■□□□□ 0.1
CTSA-213ENST00000606782 NEDD4P46934 1319 aa15.67■□□□□ 0.1
CTSA-213ENST00000606782 LAMA4Q16363 1823 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 CLTBP09497 229 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
CTSA-213ENST00000606782 MAF1Q9H063 256 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 GPCPD1Q9NPB8 672 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 STARD7Q9NQZ5 370 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 Q9Y3F1 56 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 FRMPD2Q68DX3 1309 aaPredicted RBP15.66■□□□□ 0.1
CTSA-213ENST00000606782 WDR19Q8NEZ3 1342 aa15.66■□□□□ 0.1
CTSA-213ENST00000606782 LCTP09848 1927 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 KDM4AO75164 1064 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 ASGR1P07306 291 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 C6orf222P0C671 652 aaPredicted RBP15.65■□□□□ 0.1
CTSA-213ENST00000606782 ITGB8P26012 769 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
CTSA-213ENST00000606782 TNFAIP2Q03169 654 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 FAAP100Q0VG06 881 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 IQSEC1Q6DN90 963 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 FAM109BQ6ICB4 259 aaPredicted RBP15.65■□□□□ 0.1
CTSA-213ENST00000606782 TAPT1Q6NXT6 567 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 CLEC4DQ8WXI8 215 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 BADQ92934 168 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 GLT1D1Q96MS3 346 aa15.65■□□□□ 0.1
CTSA-213ENST00000606782 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
CTSA-213ENST00000606782 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.64■□□□□ 0.09
CTSA-213ENST00000606782 DCDC2CA8MYV0 355 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 BAATQ14032 418 aaPredicted RBP15.64■□□□□ 0.09
CTSA-213ENST00000606782 IMMTQ16891 758 aaKnown RBP15.64■□□□□ 0.09
CTSA-213ENST00000606782 NSMFQ6X4W1 530 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 DEFB123Q8N688 67 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 RUFY2Q8WXA3 655 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 IL25Q9H293 177 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 VTA1Q9NP79 307 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 ADD3Q9UEY8 706 aaKnown RBP15.64■□□□□ 0.09
CTSA-213ENST00000606782 MROH7Q68CQ1 1323 aa15.64■□□□□ 0.09
CTSA-213ENST00000606782 RBM47A0AV96 593 aaKnown RBP15.63■□□□□ 0.09
CTSA-213ENST00000606782 NFIBO00712 420 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 PQBP1O60828 265 aaKnown RBP15.63■□□□□ 0.09
CTSA-213ENST00000606782 CDC45O75419 566 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 SMPD1P17405 629 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 SHHQ15465 462 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 ENAHQ8N8S7 591 aaPredicted RBP15.63■□□□□ 0.09
CTSA-213ENST00000606782 SLC43A3Q8NBI5 491 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 PNMA1Q8ND90 353 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 RGS22Q8NE09 1264 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 PURBQ96QR8 312 aaKnown RBP15.63■□□□□ 0.09
CTSA-213ENST00000606782 ZSCAN10Q96SZ4 725 aaPredicted RBP15.63■□□□□ 0.09
CTSA-213ENST00000606782 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 KRT23Q9C075 422 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 MTMR10Q9NXD2 777 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 TBX21Q9UL17 535 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 RAD50Q92878 1312 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 LRRC37A2A6NM11 1700 aa15.63■□□□□ 0.09
CTSA-213ENST00000606782 A0A0U1RQG5 324 aaPredicted RBP15.62■□□□□ 0.09
CTSA-213ENST00000606782 B4E1Z4 1266 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 ARVCFO00192 962 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 SGSM2O43147 1006 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 CABYRO75952 493 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 ALDH5A1P51649 535 aaPredicted RBP15.62■□□□□ 0.09
CTSA-213ENST00000606782 C9orf50Q5SZB4 431 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 CNNM2Q9H8M5 875 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 PDGFCQ9NRA1 345 aa15.62■□□□□ 0.09
CTSA-213ENST00000606782 TMEM39AQ9NV64 488 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms