RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 EPHX2P34913 555 aa24.55■■□□□ 1.52
USP6NL-204ENST00000606752 SPP2Q13103 211 aa24.55■■□□□ 1.52
USP6NL-204ENST00000606752 USH1GQ495M9 461 aa24.55■■□□□ 1.52
USP6NL-204ENST00000606752 VWA3AA6NCI4 1184 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 CCNT1O60563 726 aaKnown RBP24.54■■□□□ 1.52
USP6NL-204ENST00000606752 USP2O75604 605 aaPredicted RBP24.54■■□□□ 1.52
USP6NL-204ENST00000606752 MTMR2Q13614 643 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 NOL9Q5SY16 702 aaKnown RBP24.54■■□□□ 1.52
USP6NL-204ENST00000606752 SASS6Q6UVJ0 657 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 ZNF280CQ8ND82 737 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 FBXO28Q9NVF7 368 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 BACE1P56817 501 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 TYRO3Q06418 890 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 MCTP2Q6DN12 878 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 KRT26Q7Z3Y9 468 aa24.54■■□□□ 1.52
USP6NL-204ENST00000606752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.54■■□□□ 1.52
USP6NL-204ENST00000606752 POLR2AP24928 1970 aaKnown RBP24.54■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L15C9J2P7 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L13C9JLJ4 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 ADM5C9JUS6 153 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L11C9JVI0 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L18D6R9N7 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L22D6RA61 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L17D6RBQ6 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L19D6RCP7 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L20D6RJB6 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 PRPHP41219 470 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L24Q0WX57 530 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 IL17AQ16552 155 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 USP17L6PQ6QN14 398 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 TMEM60Q9H2L4 133 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 EMILIN3Q9NT22 766 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 ZHX2Q9Y6X8 837 aa24.53■■□□□ 1.52
USP6NL-204ENST00000606752 MEIS2O14770 477 aa24.52■■□□□ 1.52
USP6NL-204ENST00000606752 USP49Q70CQ1 688 aa24.52■■□□□ 1.52
USP6NL-204ENST00000606752 TEX2Q8IWB9 1127 aa24.52■■□□□ 1.52
USP6NL-204ENST00000606752 PRPF38AQ8NAV1 312 aaKnown RBP24.52■■□□□ 1.52
USP6NL-204ENST00000606752 LONP1P36776 959 aaKnown RBP24.51■■□□□ 1.51
USP6NL-204ENST00000606752 LONRF3Q496Y0 759 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 DTHD1Q6ZMT9 781 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 ELOA2Q8IYF1 753 aaPredicted RBP24.51■■□□□ 1.51
USP6NL-204ENST00000606752 EPSTI1Q96J88 318 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 DOCK1Q14185 1865 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 POLR2DO15514 142 aaKnown RBP24.51■■□□□ 1.51
USP6NL-204ENST00000606752 PPP1R12BO60237 982 aaPredicted RBP24.51■■□□□ 1.51
USP6NL-204ENST00000606752 NEMFO60524 1076 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 VCAM1P19320 739 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 AP3B2Q13367 1082 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 PRKG1Q13976 671 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 CCDC174Q6PII3 467 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 DLK2Q6UY11 383 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 KRBA2Q6ZNG9 492 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 RNF214Q8ND24 703 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 SYMPKQ92797 1274 aaKnown RBP24.51■■□□□ 1.51
USP6NL-204ENST00000606752 SLF1Q9BQI6 1058 aa24.51■■□□□ 1.51
USP6NL-204ENST00000606752 IQCA1LA6NCM1 817 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 C19orf81C9J6K1 198 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 EDIL3O43854 480 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 MAP3K9P80192 1104 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 CNNM3Q8NE01 707 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 KIAA1468Q9P260 1216 aa24.5■■□□□ 1.51
USP6NL-204ENST00000606752 OR52Z1P0C646 297 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 DGKZQ13574 1117 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 PPP4R3AQ6IN85 833 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 SAMD1Q6SPF0 538 aaPredicted RBP24.49■■□□□ 1.51
USP6NL-204ENST00000606752 TAF1DQ9H5J8 278 aaPredicted RBP24.49■■□□□ 1.51
USP6NL-204ENST00000606752 OPLAHO14841 1288 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 FOSP01100 380 aaPredicted RBP24.49■■□□□ 1.51
USP6NL-204ENST00000606752 C12orf42Q96LP6 360 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 PANK2Q9BZ23 570 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 TANGO6Q9C0B7 1094 aa24.49■■□□□ 1.51
USP6NL-204ENST00000606752 PIK3CDO00329 1044 aa24.48■■□□□ 1.51
USP6NL-204ENST00000606752 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.48■■□□□ 1.51
USP6NL-204ENST00000606752 NAP1L4Q99733 375 aaKnown RBP24.48■■□□□ 1.51
USP6NL-204ENST00000606752 ANO3Q9BYT9 981 aa24.48■■□□□ 1.51
USP6NL-204ENST00000606752 RPAP3Q9H6T3 665 aaPredicted RBP24.48■■□□□ 1.51
USP6NL-204ENST00000606752 MRPL11Q9Y3B7 192 aaKnown RBP24.48■■□□□ 1.51
USP6NL-204ENST00000606752 TAL1P17542 331 aaPredicted RBP24.47■■□□□ 1.51
USP6NL-204ENST00000606752 LDHDQ86WU2 507 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 PDILTQ8N807 584 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 HOOK1Q9UJC3 728 aaKnown RBP24.47■■□□□ 1.51
USP6NL-204ENST00000606752 FLOT1O75955 427 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 GCFC2P16383 781 aaKnown RBP24.47■■□□□ 1.51
USP6NL-204ENST00000606752 USP11P51784 963 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 KANK3Q6NY19 840 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 ERCC4Q92889 916 aaPredicted RBP24.47■■□□□ 1.51
USP6NL-204ENST00000606752 PPP1R9AQ9ULJ8 1098 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 AFG3L2Q9Y4W6 797 aa24.47■■□□□ 1.51
USP6NL-204ENST00000606752 ABCB11O95342 1321 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 TDP2O95551 362 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 ICAM1P05362 532 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 NF2P35240 595 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 IREB2P48200 963 aaKnown RBP24.46■■□□□ 1.51
USP6NL-204ENST00000606752 VGLL4Q14135 290 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 MTMR9Q96QG7 549 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 PYM1Q9BRP8 204 aaKnown RBP24.46■■□□□ 1.51
USP6NL-204ENST00000606752 SERTAD1Q9UHV2 236 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 SNCAIPQ9Y6H5 919 aa24.46■■□□□ 1.51
USP6NL-204ENST00000606752 A0A087X0B3 334 aa24.45■■□□□ 1.5
USP6NL-204ENST00000606752 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms