RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PPP4R3AQ6IN85 833 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SHC4Q6S5L8 630 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PRPF38AQ8NAV1 312 aaKnown RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 COA7Q96BR5 231 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TSPY26PQ9H489 355 aa13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MAP3K20Q9NYL2 800 aaKnown RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TRPM7Q96QT4 1865 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SYKP43405 635 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 IREB2P48200 963 aaKnown RBP13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 USP11P51784 963 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NDUFA8P51970 172 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SH3D19Q5HYK7 790 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 KIAA1755Q5JYT7 1200 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 C4orf32Q8N8J7 132 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 AK8Q96MA6 479 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SLC26A4O43511 780 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 USP2O75604 605 aaPredicted RBP13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 ZNF202O95125 648 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 ICAM1P05362 532 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 OAZ1P54368 228 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 INF2Q27J81 1249 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 KRT26Q7Z3Y9 468 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GLIS2Q9BZE0 524 aaPredicted RBP13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 TAF1DQ9H5J8 278 aaPredicted RBP13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 KCNH3Q9ULD8 1083 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 RABGAP1Q9Y3P9 1069 aa13.97□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CYP3A7-CYP3A51PA0A087WV96 503 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NEMFO60524 1076 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 VCAM1P19320 739 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CYP3A7P24462 503 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 DEKP35659 375 aaKnown RBP13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 ZNF174Q15697 407 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 RASGRP4Q8TDF6 673 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 MBOAT7Q96N66 472 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 CSADQ9Y600 493 aa13.96□□□□□ -0.17
NEDD8-MDP1-203ENST00000604306 WNT7AO00755 349 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MEIS2O14770 477 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 OR52Z1P0C646 297 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MCM7P33993 719 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TXLNAP40222 546 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SEMA3FQ13275 785 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MTMR2Q13614 643 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ANKRD13AQ8IZ07 590 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CLIC6Q96NY7 704 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SLC38A10Q9HBR0 1119 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ADAMTS5Q9UNA0 930 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SNCAIPQ9Y6H5 919 aa13.95□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TBX3O15119 743 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CYP3A4P08684 503 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ATP2B1P20020 1258 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CIITAP33076 1130 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SREBF1P36956 1147 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PPATQ06203 517 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SPP2Q13103 211 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 LETM2Q2VYF4 491 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 JAKMIP3Q5VZ66 844 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SASS6Q6UVJ0 657 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 KRBA2Q6ZNG9 492 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ZKSCAN4Q969J2 545 aaPredicted RBP13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 ANO3Q9BYT9 981 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 RAB34Q9BZG1 259 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 MAGEF1Q9HAY2 307 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SCAF8Q9UPN6 1271 aaKnown RBP13.94□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 SPDYE3A6NKU9 549 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 OPLAHO14841 1288 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 FKBP1BP68106 108 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 TYRO3Q06418 890 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 VGLL4Q14135 290 aa13.93□□□□□ -0.18
NEDD8-MDP1-203ENST00000604306 PDIA5Q14554 519 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 363 ms