RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EFCAB13Q8IY85 973 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 TCEAL8Q8IYN2 117 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 CHAC2Q8WUX2 184 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 CFHR5Q9BXR6 569 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 PRKD2Q9BZL6 878 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ANKEF1Q9NU02 776 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 SPTLC3Q9NUV7 552 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 HOXC10Q9NYD6 342 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ZFATQ9P243 1243 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 ZBTB21Q9ULJ3 1066 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 PTCH2Q9Y6C5 1203 aa5.68□□□□□ -1.5
SPTBN1-206ENST00000602898 GPATCH8Q9UKJ3 1502 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 FAM155AB1AL88 458 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 B3GALNT1O75752 331 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CPP00450 1065 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 TPM1P09493 284 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 FGFR4P22455 802 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 SCTRP47872 440 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 RABL6Q3YEC7 729 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ERFEQ4G0M1 354 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 MSS51Q4VC12 460 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CFAP58Q5T655 872 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 TTC19Q6DKK2 380 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CENPQQ7L2Z9 268 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 DAAM2Q86T65 1068 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 TAX1BP1Q86VP1 789 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 TRPM4Q8TD43 1214 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ATXN2LQ8WWM7 1075 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 KIF1BPQ96EK5 621 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ELAC2Q9BQ52 826 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ARHGAP9Q9BRR9 750 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CPSF2Q9P2I0 782 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 SAMD9LQ8IVG5 1584 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 PRXQ9BXM0 1461 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 XPOTO43592 962 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 SMC2O95347 1197 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 IMPDH2P12268 514 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 PRPHP41219 470 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 RAD52P43351 418 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 TRIM32Q13049 653 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC5A9Q2M3M2 681 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CCDC30Q5VVM6 783 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 NAIF1Q69YI7 327 aaPredicted RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 PI16Q6UXB8 463 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 OTUD6AQ7L8S5 288 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 RNF180Q86T96 592 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ZNF511Q8NB15 262 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 MIEF2Q96C03 454 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 CDK5RAP3Q96JB5 506 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 AGAP3Q96P47 875 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 KATNAL1Q9BW62 490 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 DNAI2Q9GZS0 605 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 NIF3L1Q9GZT8 377 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 ATP8A2Q9NTI2 1148 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 PIH1D1Q9NWS0 290 aaKnown RBP5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 SNCAIPQ9Y6H5 919 aa5.67□□□□□ -1.5
SPTBN1-206ENST00000602898 NEXMIFQ5QGS0 1516 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 NPHP4O75161 1426 aaPredicted RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 DHX29Q7Z478 1369 aaKnown RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 KIF7Q2M1P5 1343 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 CTNNA1P35221 906 aaKnown RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 SOX11P35716 441 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 SIK1P57059 783 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 NCBP1Q09161 790 aaKnown RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 STRN3Q13033 797 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 GFOD2Q3B7J2 385 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 IGF2-ASQ6U949 168 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 ZBTB33Q86T24 672 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 NCAPG2Q86XI2 1143 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 GBP4Q96PP9 640 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 KIF2CQ99661 725 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 RPAP3Q9H6T3 665 aaPredicted RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 CFAP45Q9UL16 551 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 PHTF1Q9UMS5 762 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 PA2G4Q9UQ80 394 aaKnown RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 RTEL1-TNFRSF6BF6WH68 1400 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 JCADQ9P266 1359 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 TNFRSF10AO00220 468 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 CPLX1O14810 134 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 SLC27A2O14975 620 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 BBOX1O75936 387 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 MYBL2P10244 700 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 HTR3AP46098 478 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 PFKPQ01813 784 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 KCNC4Q03721 635 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 ELF2Q15723 593 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 OXLD1Q5BKU9 147 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 TEX35Q5T0J7 233 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 ZNF772Q68DY9 489 aaPredicted RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 TTLL5Q6EMB2 1281 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 LIAT1Q6ZQX7 453 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 RBM12BQ8IXT5 1001 aaKnown RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 DRAXINQ8NBI3 349 aaPredicted RBP5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 GIMAP1Q8WWP7 306 aa5.66□□□□□ -1.5
SPTBN1-206ENST00000602898 RABEP2Q9H5N1 569 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms