RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 GNASQ5JWF2 1037 aa25.01■■□□□ 1.59
PPFIA3-209ENST00000602783 UPF3AQ9H1J1 476 aaKnown RBP25.01■■□□□ 1.59
PPFIA3-209ENST00000602783 SDSP20132 328 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 SLC16A2P36021 539 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 HAND2P61296 217 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 IRX6P78412 446 aaPredicted RBP25■■□□□ 1.59
PPFIA3-209ENST00000602783 TTBK2Q6IQ55 1244 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 NOL8Q76FK4 1167 aaKnown RBP25■■□□□ 1.59
PPFIA3-209ENST00000602783 TMEM47Q9BQJ4 181 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 CCPG1Q9ULG6 757 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 ELP1O95163 1332 aa25■■□□□ 1.59
PPFIA3-209ENST00000602783 TOP1P11387 765 aaKnown RBP24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 TNFAIP2Q03169 654 aa24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 ZNF697Q5TEC3 545 aa24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 NSMFQ6X4W1 530 aa24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 TCP11L1Q9NUJ3 509 aa24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 CYP39A1Q9NYL5 469 aa24.99■■□□□ 1.59
PPFIA3-209ENST00000602783 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-209ENST00000602783 EPHB4P54760 987 aa24.98■■□□□ 1.59
PPFIA3-209ENST00000602783 GUCD1Q96NT3 240 aa24.98■■□□□ 1.59
PPFIA3-209ENST00000602783 DDX49Q9Y6V7 483 aaKnown RBP24.98■■□□□ 1.59
PPFIA3-209ENST00000602783 FRMPD2Q68DX3 1309 aaPredicted RBP24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 ICAM1P05362 532 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 CDK7P50613 346 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 BEX3Q00994 111 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 FPGSQ05932 587 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 BTNL9Q6UXG8 535 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 MFSD6Q6ZSS7 791 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 RANBP17Q9H2T7 1088 aaKnown RBP24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 GPCPD1Q9NPB8 672 aa24.97■■□□□ 1.59
PPFIA3-209ENST00000602783 ASTN1O14525 1302 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 MROH7Q68CQ1 1323 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 A0A0U1RQG5 324 aaPredicted RBP24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 CTAGE5O15320 804 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 MFAP1P55081 439 aaKnown RBP24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 AKNAD1Q5T1N1 836 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 SYDE2Q5VT97 1194 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 RNPC3Q96LT9 517 aaKnown RBP24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 DIAPH3Q9NSV4 1193 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 A0A0C4DFX4 3053 aa24.96■■□□□ 1.59
PPFIA3-209ENST00000602783 ARVCFO00192 962 aa24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 DLL1O00548 723 aa24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 TIMP1P01033 207 aa24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 SMAD3P84022 425 aaKnown RBP24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 EEPD1Q7L9B9 569 aa24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 PURBQ96QR8 312 aaKnown RBP24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 PDGFCQ9NRA1 345 aa24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 GNEQ9Y223 722 aaKnown RBP24.95■■□□□ 1.58
PPFIA3-209ENST00000602783 NKX3-2P78367 333 aa24.94■■□□□ 1.58
PPFIA3-209ENST00000602783 CWC27Q6UX04 472 aaKnown RBP24.94■■□□□ 1.58
PPFIA3-209ENST00000602783 TTC14Q96N46 770 aa24.94■■□□□ 1.58
PPFIA3-209ENST00000602783 SEMA6BQ9H3T3 888 aa24.94■■□□□ 1.58
PPFIA3-209ENST00000602783 TBX21Q9UL17 535 aa24.94■■□□□ 1.58
PPFIA3-209ENST00000602783 DYNC1LI2O43237 492 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 PDHBP11177 359 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 PCP11498 1178 aaKnown RBP24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 SMPD1P17405 629 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 PDE4AP27815 886 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 BAATQ14032 418 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 IQSEC1Q6DN90 963 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 TAPT1Q6NXT6 567 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 TLK2Q86UE8 772 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 TBC1D10CQ8IV04 446 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 FBXO16Q8IX29 292 aaPredicted RBP24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 AP5M1Q9H0R1 490 aa24.93■■□□□ 1.58
PPFIA3-209ENST00000602783 HIP1O00291 1037 aa24.92■■□□□ 1.58
PPFIA3-209ENST00000602783 PTGS1P23219 599 aa24.92■■□□□ 1.58
PPFIA3-209ENST00000602783 CXCL17Q6UXB2 119 aa24.92■■□□□ 1.58
PPFIA3-209ENST00000602783 RNF41Q9H4P4 317 aaPredicted RBP24.92■■□□□ 1.58
PPFIA3-209ENST00000602783 NFIBO00712 420 aa24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 ZNF213O14771 459 aa24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 TLR3O15455 904 aaKnown RBP24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 FSCN1Q16658 493 aaKnown RBP24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 MFSD5Q6N075 450 aa24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 KIAA1211Q6ZU35 1233 aa24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 FAM126BQ8IXS8 530 aa24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 CDX2Q99626 313 aaPredicted RBP24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 ADD3Q9UEY8 706 aaKnown RBP24.91■■□□□ 1.58
PPFIA3-209ENST00000602783 PTPDC1A2A3K4 754 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 ZNF543Q08ER8 600 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 TMEM63BQ5T3F8 832 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 MORC4Q8TE76 937 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 ESR2Q92731 530 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 ZKSCAN3Q9BRR0 538 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 VTA1Q9NP79 307 aa24.9■■□□□ 1.58
PPFIA3-209ENST00000602783 NEDD4P46934 1319 aa24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 ZEB2O60315 1214 aa24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 CABYRO75952 493 aa24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 ALDH5A1P51649 535 aaPredicted RBP24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 PPP1R12CQ9BZL4 782 aa24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 TTYH1Q9H313 450 aaPredicted RBP24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 Q9Y3F1 56 aa24.89■■□□□ 1.58
PPFIA3-209ENST00000602783 LRRC37A2A6NM11 1700 aa24.89■■□□□ 1.57
PPFIA3-209ENST00000602783 SNHG28P0DPA3 235 aa24.88■■□□□ 1.57
PPFIA3-209ENST00000602783 GSPT1P15170 499 aaKnown RBP24.88■■□□□ 1.57
PPFIA3-209ENST00000602783 PPIGQ13427 754 aaKnown RBP eCLIP24.88■■□□□ 1.57
PPFIA3-209ENST00000602783 TTC22Q5TAA0 569 aa24.88■■□□□ 1.57
PPFIA3-209ENST00000602783 CLEC4DQ8WXI8 215 aa24.88■■□□□ 1.57
PPFIA3-209ENST00000602783 PNMA2Q9UL42 364 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms