RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CXCR5P32302 372 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CYP2J2P51589 502 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 RWDD2BP57060 319 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 NME8Q8N427 588 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 KLC4Q9NSK0 619 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CCDC159P0C7I6 412 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CD19P15391 556 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 NAIF1Q69YI7 327 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CDAN1Q8IWY9 1227 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 HIPK4Q8NE63 616 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ACRBPQ8NEB7 543 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 APPBP2Q92624 585 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 FANCLQ9NW38 375 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 SUPT3HO75486 399 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 MORC3Q14149 939 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ARHGAP44Q17R89 818 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ANKRD20A4Q4UJ75 823 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ANKRD20A8PQ5CZ79 823 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ANKRD20A2Q5SQ80 823 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ANKRD20A1Q5TYW2 823 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 FAM47EQ6ZV65 393 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 KRT25Q7Z3Z0 450 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 SRLQ86TD4 932 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 IFNB1P01574 187 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CHGBP05060 677 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CUL4BQ13620 913 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 GEMIN8Q9NWZ8 242 aaKnown RBP9.49□□□□□ -0.89
CSMD1-216ENST00000602557 AFG3L2Q9Y4W6 797 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 BRD1O95696 1058 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 SPATA5Q8NB90 893 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 GLT8D2Q9H1C3 349 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ECT2Q9H8V3 914 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 HOXC9P31274 260 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 LZTS2Q9BRK4 669 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 TPH2Q8IWU9 490 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 U2AF1L4Q8WU68 220 aaKnown RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 DTNBP1Q96EV8 351 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 TMOD4Q9NZQ9 345 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 SCHIP1Q9P0W5 487 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 PMS1P54277 932 aaKnown RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 MAP3K7CLP57077 242 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 C11orf57Q6ZUT1 292 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 NLRC4Q9NPP4 1024 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF532Q9HCE3 1301 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 CUL3Q13618 768 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ABCB4P21439 1286 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 IGBP1P78318 339 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 PLBD2Q8NHP8 589 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 TCP10Q12799 353 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 DRC3Q9H069 523 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 EPB41L5Q9HCM4 733 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 EHHADHQ08426 723 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 EP400NLQ6ZTU2 488 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 CCDC84Q86UT8 332 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 MORC2Q9Y6X9 1032 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 USP19O94966 1318 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 SNX1Q13596 522 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 NONOQ15233 471 aaKnown RBP eCLIP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 TRAPPC3LQ5T215 181 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF608Q9ULD9 1512 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ARHGEF9O43307 516 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 GGCXP38435 758 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 CC2D1AQ6P1N0 951 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 MAML1Q92585 1016 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 PPWD1Q96BP3 646 aaKnown RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ATP8A1Q9Y2Q0 1164 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 ADCY8P40145 1251 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 RAD23BP54727 409 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 DHX9Q08211 1270 aaKnown RBP9.48□□□□□ -0.89
CSMD1-216ENST00000602557 SEPT2Q15019 361 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 TGFBRAP1Q8WUH2 860 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 WDR62O43379 1518 aa9.48□□□□□ -0.89
CSMD1-216ENST00000602557 PSDA5PKW4 1024 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 RSAD2Q8WXG1 361 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SERPINI2O75830 405 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TNNI1P19237 187 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 EPHB4P54760 987 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF790Q6PG37 636 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 LRGUKQ96M69 825 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 HIBADHP31937 336 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 IL9RQ01113 521 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 KRT81Q14533 505 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 TMED2Q15363 201 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 KRT80Q6KB66 452 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 MAPKAPK5Q8IW41 473 aa9.47□□□□□ -0.89
CSMD1-216ENST00000602557 WDR75Q8IWA0 830 aaKnown RBP9.47□□□□□ -0.89
CSMD1-216ENST00000602557 SMYD3Q9H7B4 428 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms