RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 PWP1Q13610 501 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 KCT2Q8NC54 265 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 IP6K1Q92551 441 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 DUSP23Q9BVJ7 150 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 TOGARAM1Q9Y4F4 1720 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 NSD3Q9BZ95 1437 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 RBM47A0AV96 593 aaKnown RBP9.77□□□□□ -0.85
LINC00343-209ENST00000601607 MINDY4BA8MYZ0 360 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 TAL1P17542 331 aaPredicted RBP9.77□□□□□ -0.85
LINC00343-209ENST00000601607 HMGB2P26583 209 aaKnown RBP9.77□□□□□ -0.85
LINC00343-209ENST00000601607 LMNB2Q03252 620 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 MSMPQ1L6U9 139 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
LINC00343-209ENST00000601607 LINC00116Q8NCU8 138 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 FBRSQ9HAH7 460 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 KBTBD4Q9NVX7 518 aa9.77□□□□□ -0.85
LINC00343-209ENST00000601607 SBNO2Q9Y2G9 1366 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 C4BP0C0L5 1744 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 WNT11O96014 354 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 GRK4P32298 578 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
LINC00343-209ENST00000601607 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
LINC00343-209ENST00000601607 ARMCX6Q7L4S7 300 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 RHOVQ96L33 236 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 COPRSQ9NQ92 184 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 PRDM10Q9NQV6 1147 aa9.76□□□□□ -0.85
LINC00343-209ENST00000601607 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 F13A1P00488 732 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 KCNA3P22001 575 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 FAM160A1Q05DH4 1040 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 CCDC84Q86UT8 332 aaPredicted RBP9.75□□□□□ -0.85
LINC00343-209ENST00000601607 FAM181AQ8N9Y4 354 aa9.75□□□□□ -0.85
LINC00343-209ENST00000601607 ZC3H7BQ9UGR2 993 aaKnown RBP9.75□□□□□ -0.85
LINC00343-209ENST00000601607 KIAA1551Q9HCM1 1747 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 BPNT1O95861 308 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 NKG7Q16617 165 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 SNAP47Q5SQN1 464 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 HID1Q8IV36 788 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 USHBP1Q8N6Y0 703 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 TMEM87AQ8NBN3 555 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 SMARCC1Q92922 1105 aaPredicted RBP9.74□□□□□ -0.85
LINC00343-209ENST00000601607 ABHD8Q96I13 439 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
LINC00343-209ENST00000601607 FAM221AA4D161 298 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 ADAMTS4O75173 837 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 LRIG2O94898 1065 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 VEGFAP15692 232 aaPredicted RBP9.73□□□□□ -0.85
LINC00343-209ENST00000601607 SLBPQ14493 270 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00343-209ENST00000601607 DALRD3Q5D0E6 543 aaKnown RBP9.73□□□□□ -0.85
LINC00343-209ENST00000601607 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 GOLM1Q8NBJ4 401 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 FAM208AQ9UK61 1670 aaKnown RBP9.73□□□□□ -0.85
LINC00343-209ENST00000601607 KIAA1210Q9ULL0 1709 aa9.73□□□□□ -0.85
LINC00343-209ENST00000601607 CILPO75339 1184 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 FBLN1P23142 703 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 HOXC9P31274 260 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 CTCFP49711 727 aaPredicted RBP9.72□□□□□ -0.85
LINC00343-209ENST00000601607 ITPK1Q13572 414 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 GATAD2BQ8WXI9 593 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 PIGBQ92521 554 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 BACH2Q9BYV9 841 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 FOXQ1Q9C009 403 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 BSDC1Q9NW68 430 aaPredicted RBP9.72□□□□□ -0.85
LINC00343-209ENST00000601607 RNF114Q9Y508 228 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 LTN1O94822 1766 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 N4BP2Q86UW6 1770 aaPredicted RBP9.72□□□□□ -0.85
LINC00343-209ENST00000601607 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
LINC00343-209ENST00000601607 UBR3Q6ZT12 1888 aa9.71□□□□□ -0.85
LINC00343-209ENST00000601607 CYP27B1O15528 508 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 PGRP06401 933 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 AMPHP49418 695 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 LBX1P52954 281 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 TMF1P82094 1093 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 NLGN1Q8N2Q7 840 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 RAPGEF4Q8WZA2 1011 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.86
LINC00343-209ENST00000601607 U3KQE9 123 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 CGNL1Q0VF96 1302 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.86
LINC00343-209ENST00000601607 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.86
LINC00343-209ENST00000601607 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 TAF1LQ8IZX4 1826 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 GLTPD2A6NH11 291 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 CAP2P40123 477 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 PDE4BQ07343 736 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 PRAMEF13Q5VWM6 474 aa9.7□□□□□ -0.86
LINC00343-209ENST00000601607 PLD6Q8N2A8 252 aaKnown RBP9.7□□□□□ -0.86
LINC00343-209ENST00000601607 HEXIM2Q96MH2 286 aaKnown RBP9.7□□□□□ -0.86
LINC00343-209ENST00000601607 SLITRK5O94991 958 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 PRNPP04156 253 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 GYS1P13807 737 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 GARTP22102 1010 aa9.69□□□□□ -0.86
LINC00343-209ENST00000601607 CHRNA5P30532 468 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms