RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RANBP17Q9H2T7 1088 aaKnown RBP20.04■□□□□ 0.8
SCAF1-204ENST00000601038 CYP39A1Q9NYL5 469 aa20.04■□□□□ 0.8
SCAF1-204ENST00000601038 MROH7Q68CQ1 1323 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 CTAGE5O15320 804 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 MFAP1P55081 439 aaKnown RBP20.03■□□□□ 0.8
SCAF1-204ENST00000601038 HAND2P61296 217 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 AKNAD1Q5T1N1 836 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 ZNF697Q5TEC3 545 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 B4GALNT3Q6L9W6 998 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 MFSD6Q6ZSS7 791 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 CHD1LQ86WJ1 897 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 VTI1AQ96AJ9 217 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 TTC14Q96N46 770 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 OSBPL3Q9H4L5 887 aa20.03■□□□□ 0.8
SCAF1-204ENST00000601038 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.02■□□□□ 0.8
SCAF1-204ENST00000601038 SDSP20132 328 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 SLC16A2P36021 539 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 SMAD3P84022 425 aaKnown RBP20.02■□□□□ 0.8
SCAF1-204ENST00000601038 FPGSQ05932 587 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 SYDE2Q5VT97 1194 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 NSMFQ6X4W1 530 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
SCAF1-204ENST00000601038 PLEKHM2Q8IWE5 1019 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 GUCD1Q96NT3 240 aa20.02■□□□□ 0.8
SCAF1-204ENST00000601038 GNEQ9Y223 722 aaKnown RBP20.02■□□□□ 0.8
SCAF1-204ENST00000601038 ASTN1O14525 1302 aa20.02■□□□□ 0.79
SCAF1-204ENST00000601038 A0A0U1RQG5 324 aaPredicted RBP20.01■□□□□ 0.79
SCAF1-204ENST00000601038 ARVCFO00192 962 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 TIMP1P01033 207 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 IGHDP01880 384 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 EPHB4P54760 987 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 NUCB1Q02818 461 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 IQSEC1Q6DN90 963 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 YTHDC1Q96MU7 727 aaKnown RBP20.01■□□□□ 0.79
SCAF1-204ENST00000601038 FAM161BQ96MY7 647 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 RNF41Q9H4P4 317 aaPredicted RBP20.01■□□□□ 0.79
SCAF1-204ENST00000601038 TBX21Q9UL17 535 aa20.01■□□□□ 0.79
SCAF1-204ENST00000601038 FRMPD2Q68DX3 1309 aaPredicted RBP20.01■□□□□ 0.79
SCAF1-204ENST00000601038 PDHBP11177 359 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 TLK2Q86UE8 772 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 MORC4Q8TE76 937 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
SCAF1-204ENST00000601038 GPCPD1Q9NPB8 672 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 PNMA2Q9UL42 364 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 Q9Y3F1 56 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 COL6A3P12111 3177 aa20■□□□□ 0.79
SCAF1-204ENST00000601038 SMPD1P17405 629 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 BEX3Q00994 111 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 BAATQ14032 418 aaPredicted RBP19.99■□□□□ 0.79
SCAF1-204ENST00000601038 TAPT1Q6NXT6 567 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 TBC1D10CQ8IV04 446 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 AP5M1Q9H0R1 490 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 SEMA6BQ9H3T3 888 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 PDGFCQ9NRA1 345 aa19.99■□□□□ 0.79
SCAF1-204ENST00000601038 ADD3Q9UEY8 706 aaKnown RBP19.99■□□□□ 0.79
SCAF1-204ENST00000601038 DDX49Q9Y6V7 483 aaKnown RBP19.99■□□□□ 0.79
SCAF1-204ENST00000601038 LOC102724159A0A0B4J2E5 919 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 DLL1O00548 723 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 ZNF213O14771 459 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 CABYRO75952 493 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 NT5C2P49902 561 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 PWP2Q15269 919 aaKnown RBP19.98■□□□□ 0.79
SCAF1-204ENST00000601038 FSCN1Q16658 493 aaKnown RBP19.98■□□□□ 0.79
SCAF1-204ENST00000601038 MFSD5Q6N075 450 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 EEPD1Q7L9B9 569 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 FAM126BQ8IXS8 530 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 ESR2Q92731 530 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 PURBQ96QR8 312 aaKnown RBP19.98■□□□□ 0.79
SCAF1-204ENST00000601038 VTA1Q9NP79 307 aa19.98■□□□□ 0.79
SCAF1-204ENST00000601038 NFIBO00712 420 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 TLR3O15455 904 aaKnown RBP19.97■□□□□ 0.79
SCAF1-204ENST00000601038 DYNC1LI2O43237 492 aaPredicted RBP19.97■□□□□ 0.79
SCAF1-204ENST00000601038 ZEB2O60315 1214 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 CWC27Q6UX04 472 aaKnown RBP19.97■□□□□ 0.79
SCAF1-204ENST00000601038 CXCL17Q6UXB2 119 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 DGKHQ86XP1 1220 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
SCAF1-204ENST00000601038 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
SCAF1-204ENST00000601038 HIP1O00291 1037 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 CD4P01730 458 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 ALDH5A1P51649 535 aaPredicted RBP19.96■□□□□ 0.79
SCAF1-204ENST00000601038 KIAA1211Q6ZU35 1233 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 CLEC4DQ8WXI8 215 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 CDX2Q99626 313 aaPredicted RBP19.96■□□□□ 0.79
SCAF1-204ENST00000601038 SEZ6LQ9BYH1 1024 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 DIAPH3Q9NSV4 1193 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 NEDD4P46934 1319 aa19.96■□□□□ 0.79
SCAF1-204ENST00000601038 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.95■□□□□ 0.78
SCAF1-204ENST00000601038 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.95■□□□□ 0.78
SCAF1-204ENST00000601038 PTPDC1A2A3K4 754 aa19.95■□□□□ 0.78
SCAF1-204ENST00000601038 PPIGQ13427 754 aaKnown RBP eCLIP19.95■□□□□ 0.783e-15■■■□□ 15.9
SCAF1-204ENST00000601038 CCDC178Q5BJE1 867 aa19.95■□□□□ 0.78
SCAF1-204ENST00000601038 GPATCH4Q5T3I0 446 aaKnown RBP19.95■□□□□ 0.78
SCAF1-204ENST00000601038 TTYH1Q9H313 450 aaPredicted RBP19.95■□□□□ 0.78
SCAF1-204ENST00000601038 LCTP09848 1927 aa19.95■□□□□ 0.78
SCAF1-204ENST00000601038 WDR19Q8NEZ3 1342 aa19.95■□□□□ 0.78
SCAF1-204ENST00000601038 LRRC37A2A6NM11 1700 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms