RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ECHDC1Q9NTX5 307 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 RNF146Q9NTX7 359 aa19.98■□□□□ 0.79
USE1-208ENST00000600970 PLIN4Q96Q06 1357 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 MYO9BQ13459 2157 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 DYNC1LI2O43237 492 aaPredicted RBP19.97■□□□□ 0.79
USE1-208ENST00000600970 B4GALT4O60513 344 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 SMPD1P17405 629 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 STAT2P52630 851 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 RABGGTBP53611 331 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 NEDD1Q8NHV4 660 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 AP5M1Q9H0R1 490 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 TRPV6Q9H1D0 765 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 WNT8AQ9H1J5 351 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
USE1-208ENST00000600970 REV3LO60673 3130 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
USE1-208ENST00000600970 LCTP09848 1927 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 RNF113AO15541 343 aaKnown RBP19.96■□□□□ 0.79
USE1-208ENST00000600970 ZEB2O60315 1214 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 GNAT2P19087 354 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 TKFCQ3LXA3 575 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 FAM160B2Q86V87 743 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 CHURC1Q8WUH1 139 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 TRERF1Q96PN7 1200 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 SEZ6LQ9BYH1 1024 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 PDGFCQ9NRA1 345 aa19.96■□□□□ 0.79
USE1-208ENST00000600970 ISY1Q9ULR0 285 aaKnown RBP19.96■□□□□ 0.79
USE1-208ENST00000600970 CHD7Q9P2D1 2997 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 XIRP2A4UGR9 3374 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 PATL2C9JE40 543 aaKnown RBP19.95■□□□□ 0.78
USE1-208ENST00000600970 M0R2C6 588 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 APPP05067 770 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 TSPY3P0CV98 308 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 TSPY8P0CW00 308 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 ALAS1P13196 640 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 MYOGP15173 224 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 PSMC6P62333 389 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 TMEM63BQ5T3F8 832 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 PPP2R2DQ66LE6 453 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 IQSEC1Q6DN90 963 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 TAPT1Q6NXT6 567 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 RPUSD2Q8IZ73 545 aaKnown RBP19.95■□□□□ 0.78
USE1-208ENST00000600970 IL27Q8NEV9 243 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 STAG1Q8WVM7 1258 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 CHMP4CQ96CF2 233 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 VWCEQ96DN2 955 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 GMCL1Q96IK5 515 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 CHMP4BQ9H444 224 aaKnown RBP19.95■□□□□ 0.78
USE1-208ENST00000600970 Q9Y3F1 56 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 SLC4A7Q9Y6M7 1214 aa19.95■□□□□ 0.78
USE1-208ENST00000600970 TCF20Q9UGU0 1960 aaKnown RBP19.95■□□□□ 0.78
USE1-208ENST00000600970 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
USE1-208ENST00000600970 TFAP4Q01664 338 aa19.94■□□□□ 0.78
USE1-208ENST00000600970 IKQ13123 557 aaPredicted RBP19.94■□□□□ 0.78
USE1-208ENST00000600970 EEPD1Q7L9B9 569 aa19.94■□□□□ 0.78
USE1-208ENST00000600970 FBXO16Q8IX29 292 aaPredicted RBP19.94■□□□□ 0.78
USE1-208ENST00000600970 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
USE1-208ENST00000600970 SCLYQ96I15 445 aa19.94■□□□□ 0.78
USE1-208ENST00000600970 PCDHA11Q9Y5I1 949 aa19.94■□□□□ 0.78
USE1-208ENST00000600970 MCCP23508 829 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 SLC1A4P43007 532 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 MUM1L1Q5H9M0 696 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 MICALL1Q8N3F8 863 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 TSPYL2Q9H2G4 693 aaPredicted RBP19.93■□□□□ 0.78
USE1-208ENST00000600970 CYP39A1Q9NYL5 469 aa19.93■□□□□ 0.78
USE1-208ENST00000600970 ZBBXA8MT70 800 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 PLA2G6O60733 806 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 BMP1P13497 986 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 SNAP25P60880 206 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 PDE4BQ07343 736 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 NECAB3Q96P71 396 aaPredicted RBP19.92■□□□□ 0.78
USE1-208ENST00000600970 ALDH8A1Q9H2A2 487 aaPredicted RBP19.92■□□□□ 0.78
USE1-208ENST00000600970 SCN5AQ14524 2016 aa19.92■□□□□ 0.78
USE1-208ENST00000600970 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
USE1-208ENST00000600970 KCTD1Q719H9 257 aa19.91■□□□□ 0.78
USE1-208ENST00000600970 PURBQ96QR8 312 aaKnown RBP19.91■□□□□ 0.78
USE1-208ENST00000600970 VTA1Q9NP79 307 aa19.91■□□□□ 0.78
USE1-208ENST00000600970 ATP2A2P16615 1042 aaKnown RBP19.9■□□□□ 0.78
USE1-208ENST00000600970 TFF2Q03403 129 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 TTLL4Q14679 1199 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 RCSD1Q6JBY9 416 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 MORC4Q8TE76 937 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 GPATCH3Q96I76 525 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 SEC62Q99442 399 aaKnown RBP19.9■□□□□ 0.78
USE1-208ENST00000600970 NACAP1Q9BZK3 213 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 PRR12Q9ULL5 1215 aa19.9■□□□□ 0.78
USE1-208ENST00000600970 SLC3A2P08195 630 aaKnown RBP19.89■□□□□ 0.77
USE1-208ENST00000600970 PFKMP08237 780 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 CYP2C9P11712 490 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 PLA2G5P39877 138 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 PPARAQ07869 468 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 NSMFQ6X4W1 530 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 RASGRP2Q7LDG7 609 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 NAPBQ9H115 298 aa19.89■□□□□ 0.77
USE1-208ENST00000600970 TRMT13Q9NUP7 481 aaKnown RBP19.89■□□□□ 0.77
USE1-208ENST00000600970 RFXAPO00287 272 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 SUPT20HL2P0C7V6 817 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 DUSP28Q4G0W2 176 aa19.88■□□□□ 0.77
USE1-208ENST00000600970 TMEM67Q5HYA8 995 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms