RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 PDGFCQ9NRA1 345 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 TRMT13Q9NUP7 481 aaKnown RBP11.93□□□□□ -0.5
HIF3A-219ENST00000600879 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
HIF3A-219ENST00000600879 GPR37L1O60883 481 aa11.92□□□□□ -0.5
HIF3A-219ENST00000600879 TAP1Q03518 808 aa11.92□□□□□ -0.5
HIF3A-219ENST00000600879 GRB10Q13322 594 aa11.92□□□□□ -0.5
HIF3A-219ENST00000600879 FSCN1Q16658 493 aaKnown RBP11.92□□□□□ -0.5
HIF3A-219ENST00000600879 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
HIF3A-219ENST00000600879 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
HIF3A-219ENST00000600879 CLIP2Q9UDT6 1046 aa11.92□□□□□ -0.5
HIF3A-219ENST00000600879 ARIH1Q9Y4X5 557 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-219ENST00000600879 LCHNA4D1U4 455 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 SMPD1P17405 629 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 RASA1P20936 1047 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 MRE11P49959 708 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 RPUSD2Q8IZ73 545 aaKnown RBP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 PURBQ96QR8 312 aaKnown RBP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 PUS7LQ9H0K6 701 aaKnown RBP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 AP5M1Q9H0R1 490 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 MKNK2Q9HBH9 465 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 SLC38A10Q9HBR0 1119 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
HIF3A-219ENST00000600879 TRANK1O15050 2925 aa11.91□□□□□ -0.5
HIF3A-219ENST00000600879 SOWAHBA6NEL2 793 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 MINDY4BA8MYZ0 360 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 PI4K2BG5E9Z4 385 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 ATP2A1O14983 1001 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 LPXNO60711 386 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 PRDM1O75626 825 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 CABYRO75952 493 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 SNAP25P60880 206 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 FBXO16Q8IX29 292 aaPredicted RBP11.9□□□□□ -0.5
HIF3A-219ENST00000600879 CHST13Q8NET6 341 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.9□□□□□ -0.5
HIF3A-219ENST00000600879 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 NYAP2Q9P242 653 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 COG5Q9UP83 839 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.5
HIF3A-219ENST00000600879 POU3F3P20264 500 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-219ENST00000600879 NKX3-2P78367 333 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 FAM133AQ8N9E0 248 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 KIF1BPQ96EK5 621 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-219ENST00000600879 ACAD9Q9H845 621 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 A1CFQ9NQ94 594 aaKnown RBP11.89□□□□□ -0.51
HIF3A-219ENST00000600879 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
HIF3A-219ENST00000600879 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
HIF3A-219ENST00000600879 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 ZEB2O60315 1214 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 ALAS1P13196 640 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 CHMP4BP1P59074 171 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 FAM47CQ5HY64 1035 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 HERC6Q8IVU3 1022 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 CEP95Q96GE4 821 aa11.88□□□□□ -0.51
HIF3A-219ENST00000600879 FTOQ9C0B1 505 aaKnown RBP eCLIP11.88□□□□□ -0.51
HIF3A-219ENST00000600879 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-219ENST00000600879 TNKSO95271 1327 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 IGKV6D-41A0A0C4DH26 115 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 ASB14A6NK59 587 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 MYL3P08590 195 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 BMP3P12645 472 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 IL9P15248 144 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 OAZ1P54368 228 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 NHLH1Q02575 133 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 TAPT1Q6NXT6 567 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 KIAA1211Q6ZU35 1233 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 SNX27Q96L92 541 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 HAUS7Q99871 368 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 SCN5AQ14524 2016 aa11.87□□□□□ -0.51
HIF3A-219ENST00000600879 GSG1L2A8MUP6 293 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 ACTN1P12814 892 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 ATP5JP18859 108 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 KCNA5P22460 613 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 RASGRP2Q7LDG7 609 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 ZNF444Q8N0Y2 327 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-219ENST00000600879 GJD3Q8N144 294 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 FBXL18Q96ME1 805 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 TRERF1Q96PN7 1200 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 STRBPQ96SI9 672 aaKnown RBP11.86□□□□□ -0.51
HIF3A-219ENST00000600879 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
HIF3A-219ENST00000600879 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms