RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FRMPD2Q68DX3 1309 aaPredicted RBP22.05■■□□□ 1.12
PNKP-213ENST00000599543 SOWAHBA6NEL2 793 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 DCDC2CA8MYV0 355 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 RAG1P15918 1043 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 SLC16A2P36021 539 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 GJA9P57773 515 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 SHHQ15465 462 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 SYDE2Q5VT97 1194 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 TTBK2Q6IQ55 1244 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 NSMFQ6X4W1 530 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 NOL8Q76FK4 1167 aaKnown RBP22.04■■□□□ 1.12
PNKP-213ENST00000599543 ANKRD33Q7Z3H0 272 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 TOX2Q96NM4 488 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 UPF3AQ9H1J1 476 aaKnown RBP22.04■■□□□ 1.12
PNKP-213ENST00000599543 RANBP17Q9H2T7 1088 aaKnown RBP22.04■■□□□ 1.12
PNKP-213ENST00000599543 DIAPH3Q9NSV4 1193 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 TMEM39AQ9NV64 488 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 MTMR10Q9NXD2 777 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 CYP39A1Q9NYL5 469 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 MROH7Q68CQ1 1323 aa22.04■■□□□ 1.12
PNKP-213ENST00000599543 KIAA0355O15063 1070 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 ASGR1P07306 291 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 GNASQ5JWF2 1037 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 C9orf50Q5SZB4 431 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 CWC27Q6UX04 472 aaKnown RBP22.03■■□□□ 1.12
PNKP-213ENST00000599543 BTNL9Q6UXG8 535 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 TBC1D10CQ8IV04 446 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 VTI1AQ96AJ9 217 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 GPCPD1Q9NPB8 672 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 A0A0C4DFX4 3053 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 ELP1O95163 1332 aa22.03■■□□□ 1.12
PNKP-213ENST00000599543 PDHBP11177 359 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 ITGB8P26012 769 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 IRX5P78411 483 aaPredicted RBP22.02■■□□□ 1.12
PNKP-213ENST00000599543 TNFAIP2Q03169 654 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 FAAP100Q0VG06 881 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 ESR2Q92731 530 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 CCDC136Q96JN2 1154 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 TTC14Q96N46 770 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 ASTN1O14525 1302 aa22.02■■□□□ 1.12
PNKP-213ENST00000599543 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.01■■□□□ 1.11
PNKP-213ENST00000599543 HIP1O00291 1037 aa22.01■■□□□ 1.11
PNKP-213ENST00000599543 ZNF213O14771 459 aa22.01■■□□□ 1.11
PNKP-213ENST00000599543 FAM109BQ6ICB4 259 aaPredicted RBP22.01■■□□□ 1.11
PNKP-213ENST00000599543 SLC17A8Q8NDX2 589 aa22.01■■□□□ 1.11
PNKP-213ENST00000599543 STXBP5LQ9Y2K9 1186 aa22.01■■□□□ 1.11
PNKP-213ENST00000599543 NEDD4P46934 1319 aa22.01■■□□□ 1.11
PNKP-213ENST00000599543 UNC80Q8N2C7 3258 aa22■■□□□ 1.11
PNKP-213ENST00000599543 A0A0U1RQG5 324 aaPredicted RBP22■■□□□ 1.11
PNKP-213ENST00000599543 FPGSQ05932 587 aa22■■□□□ 1.11
PNKP-213ENST00000599543 ZNF697Q5TEC3 545 aa22■■□□□ 1.11
PNKP-213ENST00000599543 EEPD1Q7L9B9 569 aa22■■□□□ 1.11
PNKP-213ENST00000599543 TLK2Q86UE8 772 aa22■■□□□ 1.11
PNKP-213ENST00000599543 FBXO16Q8IX29 292 aaPredicted RBP22■■□□□ 1.11
PNKP-213ENST00000599543 NT5C2P49902 561 aa21.99■■□□□ 1.11
PNKP-213ENST00000599543 ZNF543Q08ER8 600 aa21.99■■□□□ 1.11
PNKP-213ENST00000599543 ADD3Q9UEY8 706 aaKnown RBP21.99■■□□□ 1.11
PNKP-213ENST00000599543 PNMA2Q9UL42 364 aa21.99■■□□□ 1.11
PNKP-213ENST00000599543 DDX49Q9Y6V7 483 aaKnown RBP21.99■■□□□ 1.11
PNKP-213ENST00000599543 MYH6P13533 1939 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 PTPDC1A2A3K4 754 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 NFIBO00712 420 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 CTAGE5O15320 804 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 NKX3-2P78367 333 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 BEX3Q00994 111 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 BAATQ14032 418 aaPredicted RBP21.98■■□□□ 1.11
PNKP-213ENST00000599543 CENPQQ7L2Z9 268 aaPredicted RBP21.98■■□□□ 1.11
PNKP-213ENST00000599543 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 RNPC3Q96LT9 517 aaKnown RBP21.98■■□□□ 1.11
PNKP-213ENST00000599543 ZKSCAN3Q9BRR0 538 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 AP5M1Q9H0R1 490 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 VTA1Q9NP79 307 aa21.98■■□□□ 1.11
PNKP-213ENST00000599543 GNEQ9Y223 722 aaKnown RBP21.98■■□□□ 1.11
PNKP-213ENST00000599543 EYSQ5T1H1 3165 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 ARVCFO00192 962 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 SNHG28P0DPA3 235 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 SMPD1P17405 629 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 FSCN1Q16658 493 aaKnown RBP21.97■■□□□ 1.11
PNKP-213ENST00000599543 IQSEC1Q6DN90 963 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 FAM161BQ96MY7 647 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 PURBQ96QR8 312 aaKnown RBP21.97■■□□□ 1.11
PNKP-213ENST00000599543 TBX21Q9UL17 535 aa21.97■■□□□ 1.11
PNKP-213ENST00000599543 TLR3O15455 904 aaKnown RBP21.96■■□□□ 1.11
PNKP-213ENST00000599543 ZEB2O60315 1214 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 KDM4AO75164 1064 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 TIMP1P01033 207 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 CDK7P50613 346 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 ALDH5A1P51649 535 aaPredicted RBP21.96■■□□□ 1.11
PNKP-213ENST00000599543 SMAD3P84022 425 aaKnown RBP21.96■■□□□ 1.11
PNKP-213ENST00000599543 CCDC178Q5BJE1 867 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 GPATCH4Q5T3I0 446 aaKnown RBP21.96■■□□□ 1.11
PNKP-213ENST00000599543 TAPT1Q6NXT6 567 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 DGKHQ86XP1 1220 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 MORC4Q8TE76 937 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 DSCC1Q9BVC3 393 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 PDGFCQ9NRA1 345 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 WDR19Q8NEZ3 1342 aa21.96■■□□□ 1.11
PNKP-213ENST00000599543 LOC102724159A0A0B4J2E5 919 aa21.95■■□□□ 1.1
PNKP-213ENST00000599543 DYNC1LI2O43237 492 aaPredicted RBP21.95■■□□□ 1.1
PNKP-213ENST00000599543 CABYRO75952 493 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms