RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
USHBP1-206ENST00000596436 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
USHBP1-206ENST00000596436 FAM133AQ8N9E0 248 aa18.81■□□□□ 0.6
USHBP1-206ENST00000596436 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
USHBP1-206ENST00000596436 TTC28Q96AY4 2481 aa18.81■□□□□ 0.6
USHBP1-206ENST00000596436 CHD7Q9P2D1 2997 aa18.8■□□□□ 0.6
USHBP1-206ENST00000596436 PDE4BQ07343 736 aa18.8■□□□□ 0.6
USHBP1-206ENST00000596436 TBC1D10CQ8IV04 446 aa18.8■□□□□ 0.6
USHBP1-206ENST00000596436 FAM126BQ8IXS8 530 aa18.8■□□□□ 0.6
USHBP1-206ENST00000596436 ANKRD35Q8N283 1001 aa18.8■□□□□ 0.6
USHBP1-206ENST00000596436 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.8■□□□□ 0.6
USHBP1-206ENST00000596436 ZNF536O15090 1300 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 ARVCFO00192 962 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
USHBP1-206ENST00000596436 C6orf222P0C671 652 aaPredicted RBP18.79■□□□□ 0.6
USHBP1-206ENST00000596436 BMP3P12645 472 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 PTH1RQ03431 593 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 SLFN13Q68D06 897 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 LRRC47Q8N1G4 583 aaKnown RBP18.79■□□□□ 0.6
USHBP1-206ENST00000596436 SLC43A3Q8NBI5 491 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 GMCL1Q96IK5 515 aa18.79■□□□□ 0.6
USHBP1-206ENST00000596436 A0A0U1RQG5 324 aaPredicted RBP18.78■□□□□ 0.6
USHBP1-206ENST00000596436 ORC4O43929 436 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 PLA2G6O60733 806 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 CD4P01730 458 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 FGRP09769 529 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 TMEM240Q5SV17 173 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 SPC25Q9HBM1 224 aa18.78■□□□□ 0.6
USHBP1-206ENST00000596436 A1CFQ9NQ94 594 aaKnown RBP18.78■□□□□ 0.6
USHBP1-206ENST00000596436 ASTN1O14525 1302 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 LCTP09848 1927 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 STAT2P52630 851 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 TFAP4Q01664 338 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 CNTN2Q02246 1040 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 PPIGQ13427 754 aaKnown RBP eCLIP18.77■□□□□ 0.6
USHBP1-206ENST00000596436 GNASQ5JWF2 1037 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 ESYT1Q9BSJ8 1104 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 ACAD9Q9H845 621 aa18.77■□□□□ 0.6
USHBP1-206ENST00000596436 GNEQ9Y223 722 aaKnown RBP18.77■□□□□ 0.6
USHBP1-206ENST00000596436 CTDP1Q9Y5B0 961 aaPredicted RBP18.77■□□□□ 0.6
USHBP1-206ENST00000596436 TRANK1O15050 2925 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 SOWAHBA6NEL2 793 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 TSPY3P0CV98 308 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 TSPY8P0CW00 308 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 NOVP48745 357 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 SLC4A3P48751 1232 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 TKFCQ3LXA3 575 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 FAM160B2Q86V87 743 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 STAG1Q8WVM7 1258 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 ZNF576Q9H609 170 aa18.76■□□□□ 0.59
USHBP1-206ENST00000596436 NEDD4P46934 1319 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.75■□□□□ 0.59
USHBP1-206ENST00000596436 ZNF213O14771 459 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 CSF2RAP15509 400 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 AKNAD1Q5T1N1 836 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 CCDC174Q6PII3 467 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 USP38Q8NB14 1042 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 CHURC1Q8WUH1 139 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 TIFAQ96CG3 184 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 AGBL1Q96MI9 1066 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 RNF146Q9NTX7 359 aa18.75■□□□□ 0.59
USHBP1-206ENST00000596436 REV3LO60673 3130 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
USHBP1-206ENST00000596436 NMT2O60551 498 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 TNFAIP2Q03169 654 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
USHBP1-206ENST00000596436 PSRC1Q6PGN9 363 aaPredicted RBP18.74■□□□□ 0.59
USHBP1-206ENST00000596436 TMEM199Q8N511 208 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 PBX4Q9BYU1 374 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 IL17RBQ9NRM6 502 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 HOMER2Q9NSB8 354 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 GRIN2DO15399 1336 aa18.74■□□□□ 0.59
USHBP1-206ENST00000596436 ASB14A6NK59 587 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 TLR3O15455 904 aaKnown RBP18.73■□□□□ 0.59
USHBP1-206ENST00000596436 CDC45O75419 566 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 CABYRO75952 493 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 SLC1A4P43007 532 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 MORC4Q8TE76 937 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 SEZ6LQ9BYH1 1024 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 LSG1Q9H089 658 aaKnown RBP18.73■□□□□ 0.59
USHBP1-206ENST00000596436 TOMM22Q9NS69 142 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
USHBP1-206ENST00000596436 PCP11498 1178 aaKnown RBP18.72■□□□□ 0.59
USHBP1-206ENST00000596436 PBX2P40425 430 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 BEX3Q00994 111 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 IMMTQ16891 758 aaKnown RBP18.72■□□□□ 0.59
USHBP1-206ENST00000596436 RCSD1Q6JBY9 416 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 TAPT1Q6NXT6 567 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 MFSD6Q6ZSS7 791 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 ZNF365Q70YC5 407 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 TLK2Q86UE8 772 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 HERVK_113Q902F9 699 aa18.72■□□□□ 0.59
USHBP1-206ENST00000596436 SYMPKQ92797 1274 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms