RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
SCN1B-204ENST00000596348 SLC5A4Q9NY91 659 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 DIS3Q9Y2L1 958 aaKnown RBP17.44■□□□□ 0.38
SCN1B-204ENST00000596348 GTF3C3Q9Y5Q9 886 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
SCN1B-204ENST00000596348 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 GJB1P08034 283 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 EN2P19622 333 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-204ENST00000596348 PSMA5P28066 241 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 CCND3P30281 292 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-204ENST00000596348 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 MFSD14CQ5VZR4 134 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 Q6ZUG5 572 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 TRPV1Q8NER1 839 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-204ENST00000596348 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 RPTORQ8N122 1335 aa17.43■□□□□ 0.38
SCN1B-204ENST00000596348 CYBAP13498 195 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 KIF5BP33176 963 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 NSMFQ6X4W1 530 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 FBXO11Q86XK2 927 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 DEFB118Q96PH6 123 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 PIGSQ96S52 555 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 AGXT2Q9BYV1 514 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
SCN1B-204ENST00000596348 HMX1Q9NP08 348 aaPredicted RBP17.42■□□□□ 0.38
SCN1B-204ENST00000596348 PNMA2Q9UL42 364 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 ASTN1O14525 1302 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 PFASO15067 1338 aa17.42■□□□□ 0.38
SCN1B-204ENST00000596348 KLF18A0A0U1RQI7 1052 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 POTEB2H3BUK9 544 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 ZBTB5O15062 677 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 CALM1P0DP23 149 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 CALM2P0DP24 149 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 CALM3P0DP25 149 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 GJA8P48165 433 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 RGS19P49795 217 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 APOBRQ0VD83 1088 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 RUFY3Q7L099 469 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 HOMER1Q86YM7 354 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
SCN1B-204ENST00000596348 FBXL16Q8N461 479 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 SRBD1Q8N5C6 995 aaKnown RBP17.41■□□□□ 0.38
SCN1B-204ENST00000596348 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
SCN1B-204ENST00000596348 BRF1Q92994 677 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 PURBQ96QR8 312 aaKnown RBP17.41■□□□□ 0.38
SCN1B-204ENST00000596348 TINF2Q9BSI4 451 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
SCN1B-204ENST00000596348 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
SCN1B-204ENST00000596348 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 ZBTB43O43298 467 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 FGD1P98174 961 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 BAATQ14032 418 aaPredicted RBP17.4■□□□□ 0.38
SCN1B-204ENST00000596348 PRAMEF19Q5SWL8 479 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 ZNF467Q7Z7K2 595 aaPredicted RBP17.4■□□□□ 0.38
SCN1B-204ENST00000596348 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 DDX49Q9Y6V7 483 aaKnown RBP17.4■□□□□ 0.38
SCN1B-204ENST00000596348 ABCB11O95342 1321 aa17.4■□□□□ 0.38
SCN1B-204ENST00000596348 OPLAHO14841 1288 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 SGPL1O95470 568 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 SNAI1O95863 264 aaPredicted RBP17.39■□□□□ 0.37
SCN1B-204ENST00000596348 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 GNAQP50148 359 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 TOB2Q14106 344 aaPredicted RBP17.39■□□□□ 0.37
SCN1B-204ENST00000596348 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 SYNE3Q6ZMZ3 975 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 TBC1D5Q92609 795 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 IL17RAQ96F46 866 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 AMNQ9BXJ7 453 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 CRISPLD2Q9H0B8 497 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
SCN1B-204ENST00000596348 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
SCN1B-204ENST00000596348 CEP290O15078 2479 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 PNMA6FA0A0J9YX94 578 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 PTPDC1A2A3K4 754 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 GOLGA8AA7E2F4 631 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 GOLGA8BA8MQT2 603 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 ANAPC15P60006 121 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 RPS6P62753 249 aaKnown RBP17.38■□□□□ 0.37
SCN1B-204ENST00000596348 FUT2Q10981 343 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 RTN1Q16799 776 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 LHX8Q68G74 356 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 RNF207Q6ZRF8 634 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 MSL3Q8N5Y2 521 aaKnown RBP17.38■□□□□ 0.37
SCN1B-204ENST00000596348 LZTS2Q9BRK4 669 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 PCDHA1Q9Y5I3 950 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 SYNGAP1Q96PV0 1343 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
SCN1B-204ENST00000596348 hCG_1642624A0A1W2PR95 340 aa17.37■□□□□ 0.37
SCN1B-204ENST00000596348 CALML3P27482 149 aa17.37■□□□□ 0.37
SCN1B-204ENST00000596348 CDC27P30260 824 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms