RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 RNPC3Q96LT9 517 aaKnown RBP13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 A1CFQ9NQ94 594 aaKnown RBP13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 RNF146Q9NTX7 359 aa13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 ADD3Q9UEY8 706 aaKnown RBP13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 STX8Q9UNK0 236 aa13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 TTC28Q96AY4 2481 aa13.92□□□□□ -0.18
SAMD4B-204ENST00000596271 ZNF536O15090 1300 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 ABCB7O75027 752 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 ICAM1P05362 532 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 MCCP23508 829 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 TMEM199Q8N511 208 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 TRERF1Q96PN7 1200 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 SEC62Q99442 399 aaKnown RBP13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 CDX2Q99626 313 aaPredicted RBP13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 VTA1Q9NP79 307 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 GNEQ9Y223 722 aaKnown RBP13.91□□□□□ -0.18
SAMD4B-204ENST00000596271 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 ITGB8P26012 769 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 IKQ13123 557 aaPredicted RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 STK11IPQ8N1F8 1099 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 AP5M1Q9H0R1 490 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 MTIF3Q9H2K0 278 aaKnown RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
SAMD4B-204ENST00000596271 B4DLN1 442 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 HAX1O00165 279 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 CTAGE5O15320 804 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 FOXP2O15409 715 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 RANBP6O60518 1105 aaKnown RBP13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 CD4P01730 458 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 MRPL12P52815 198 aaKnown RBP13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 PDE1AP54750 535 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 PSRC1Q6PGN9 363 aaPredicted RBP13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 FAM126BQ8IXS8 530 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 CYP39A1Q9NYL5 469 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 NCOR1O75376 2440 aa13.89□□□□□ -0.19
SAMD4B-204ENST00000596271 MYO9BQ13459 2157 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 FGAP02671 866 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 ALAS1P13196 640 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 SLC4A3P48751 1232 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 RGS22Q8NE09 1264 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 OTUD7AQ8TE49 926 aaPredicted RBP13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 OSBPL3Q9H4L5 887 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 WDR19Q8NEZ3 1342 aa13.88□□□□□ -0.19
SAMD4B-204ENST00000596271 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■□□ 17
SAMD4B-204ENST00000596271 KPNA6O60684 536 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 SUPT20HL2P0C7V6 817 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 EPHB4P54760 987 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 CNTN2Q02246 1040 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 DUSP28Q4G0W2 176 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 KCTD1Q719H9 257 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 TLK2Q86UE8 772 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 TTYH1Q9H313 450 aaPredicted RBP13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 CCPG1Q9ULG6 757 aa13.87□□□□□ -0.19
SAMD4B-204ENST00000596271 RBM47A0AV96 593 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 MYADML2A6NDP7 307 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 ADCY6O43306 1168 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 TMEM240Q5SV17 173 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 GPATCH4Q5T3I0 446 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 TAPT1Q6NXT6 567 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 DGKHQ86XP1 1220 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 HERVK_113Q902F9 699 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 SYMPKQ92797 1274 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 LENG1Q96BZ8 264 aaPredicted RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 POLR3EQ9NVU0 708 aa13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
SAMD4B-204ENST00000596271 EIF5BO60841 1220 aaKnown RBP13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 PFKMP08237 780 aa13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 HSPD1P10809 573 aaKnown RBP13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 SMPD1P17405 629 aa13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 DNAJB2P25686 324 aa13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 CTDSPL2Q05D32 466 aa13.85□□□□□ -0.19
SAMD4B-204ENST00000596271 ITGA7Q13683 1181 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms