RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 ADAMTS4O75173 837 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 ICAM1P05362 532 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 CAPN2P17655 700 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 CHMLP26374 656 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 NOVP48745 357 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 TLE2Q04725 743 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 ZNF543Q08ER8 600 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 PNMA1Q8ND90 353 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 TBC1D5Q92609 795 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 BADQ92934 168 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 TRIM43Q96BQ3 446 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 DSCC1Q9BVC3 393 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 TCP11L1Q9NUJ3 509 aa12.09□□□□□ -0.47
SHKBP1-210ENST00000595874 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 ACLYP53396 1101 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 TNFAIP2Q03169 654 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 IQCA1Q86XH1 822 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 ENAHQ8N8S7 591 aaPredicted RBP12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 FAM161BQ96MY7 647 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 UBAC1Q9BSL1 405 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 STARD7Q9NQZ5 370 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 PDLIM7Q9NR12 457 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
SHKBP1-210ENST00000595874 LTBP2Q14767 1821 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 SORBS3O60504 671 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 ASGR1P07306 291 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 FDX1P10109 184 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 ITGB8P26012 769 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 CHMP4BP1P59074 171 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 TKFCQ3LXA3 575 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 GNASQ5JWF2 1037 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 MAMDC4Q6UXC1 1216 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 KIAA1211Q6ZU35 1233 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 RAB11FIP4Q86YS3 637 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 TDHQ8IZJ6 230 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 KATNBL1Q9H079 304 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 ABHD16BQ9H3Z7 469 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 CTNNA3Q9UI47 895 aa12.07□□□□□ -0.48
SHKBP1-210ENST00000595874 PLA2G6O60733 806 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 CYP21A2P08686 494 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 SMPD1P17405 629 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 ALDH5A1P51649 535 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 PSMC6P62333 389 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 IFIT1BQ5T764 474 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 COPS5Q92905 334 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 TTC14Q96N46 770 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 KRT23Q9C075 422 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 GPHNQ9NQX3 736 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 NRBP1Q9UHY1 535 aa12.06□□□□□ -0.48
SHKBP1-210ENST00000595874 ASB14A6NK59 587 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 IFIT3O14879 490 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 CLTBP09497 229 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 SNHG28P0DPA3 235 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 BMP8BP34820 402 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 EPHB4P54760 987 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 SHHQ15465 462 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 TAPT1Q6NXT6 567 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 CXCL17Q6UXB2 119 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 DGKHQ86XP1 1220 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 MSL3Q8N5Y2 521 aaKnown RBP12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 KLHDC9Q8NEP7 349 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 MYL10Q9BUA6 226 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 AP5M1Q9H0R1 490 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 SPC25Q9HBM1 224 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 TMEM39AQ9NV64 488 aa12.05□□□□□ -0.48
SHKBP1-210ENST00000595874 TRIOBPQ9H2D6 2365 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 MYH6P13533 1939 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 E7EWF7 191 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 CTAGE5O15320 804 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 SGSM2O43147 1006 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 MYL3P08590 195 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 PCP11498 1178 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 GJA9P57773 515 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 RPS6P62753 249 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 PDE4DQ08499 809 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 TRDNQ13061 729 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 CCSAPQ6IQ19 270 aaPredicted RBP12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms