RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 BEX3Q00994 111 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 MUM1L1Q5H9M0 696 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 TAPT1Q6NXT6 567 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 MORC4Q8TE76 937 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 CHMP4CQ96CF2 233 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 CYP39A1Q9NYL5 469 aa18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 DDX49Q9Y6V7 483 aaKnown RBP18.84■□□□□ 0.61
GTF2F1-203ENST00000594213 GRIN2DO15399 1336 aa18.83■□□□□ 0.61
GTF2F1-203ENST00000594213 ALAS1P13196 640 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 DNAJB2P25686 324 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 IKQ13123 557 aaPredicted RBP18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 PPIGQ13427 754 aaKnown RBP eCLIP18.83■□□□□ 0.65e-7■■□□□ 13.4
GTF2F1-203ENST00000594213 BTNL9Q6UXG8 535 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 VTI1AQ96AJ9 217 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 EVI5LQ96CN4 794 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 PDGFCQ9NRA1 345 aa18.83■□□□□ 0.6
GTF2F1-203ENST00000594213 MYH4Q9Y623 1939 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 CSF2RAP15509 400 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 SMPD1P17405 629 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 PTGS1P23219 599 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 GRIN2CQ14957 1233 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 CCDC174Q6PII3 467 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 CXCL17Q6UXB2 119 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 HELLSQ9NRZ9 838 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 ISY1Q9ULR0 285 aaKnown RBP18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 CHD9Q3L8U1 2897 aa18.82■□□□□ 0.6
GTF2F1-203ENST00000594213 RANBP6O60518 1105 aaKnown RBP18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 CABYRO75952 493 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 FGAP02671 866 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 ICAM1P05362 532 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 FOSL2P15408 326 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 PDE1AP54750 535 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 TMEM63BQ5T3F8 832 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 ANKRD45Q5TZF3 282 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 IQSEC1Q6DN90 963 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 TTBK2Q6IQ55 1244 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 TLK2Q86UE8 772 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 DCAF4Q8WV16 495 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 TCP11L1Q9NUJ3 509 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 Q9Y3F1 56 aa18.81■□□□□ 0.6
GTF2F1-203ENST00000594213 TLR3O15455 904 aaKnown RBP18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 DYNC1LI2O43237 492 aaPredicted RBP18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 FSCN1Q16658 493 aaKnown RBP18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 ZNF365Q70YC5 407 aa18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 TICAM2Q86XR7 235 aa18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 TMEM199Q8N511 208 aa18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 CCPG1Q9ULG6 757 aa18.8■□□□□ 0.6
GTF2F1-203ENST00000594213 MCM3APO60318 1980 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 ACRP10323 421 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 CYP2C18P33260 490 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 HDAC1Q13547 482 aaPredicted RBP18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 ITGA7Q13683 1181 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 FBXO16Q8IX29 292 aaPredicted RBP18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 TIFAQ96CG3 184 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 FAM227BQ96M60 508 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 TMEM47Q9BQJ4 181 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 SEZ6LQ9BYH1 1024 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 PPP1R12CQ9BZL4 782 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 VTA1Q9NP79 307 aa18.79■□□□□ 0.6
GTF2F1-203ENST00000594213 A0A0D9SFI3 127 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 GRXCR1A8MXD5 290 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 TOP1P11387 765 aaKnown RBP18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 SLC16A2P36021 539 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 PBX2P40425 430 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 BAATQ14032 418 aaPredicted RBP18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 MCMDC2Q4G0Z9 681 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 SYDE2Q5VT97 1194 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 NSMFQ6X4W1 530 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 HERVK_113Q902F9 699 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 PBX4Q9BYU1 374 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 AP5M1Q9H0R1 490 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 IL23AQ9NPF7 189 aa18.78■□□□□ 0.6
GTF2F1-203ENST00000594213 NFIBO00712 420 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 CCDC96Q2M329 555 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 PSRC1Q6PGN9 363 aaPredicted RBP18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 EEPD1Q7L9B9 569 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 CLEC4DQ8WXI8 215 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 VWCEQ96DN2 955 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 CRBNQ96SW2 442 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
GTF2F1-203ENST00000594213 ZMYM6O95789 1325 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 UMODL1Q5DID0 1318 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 LOC102724159A0A0B4J2E5 919 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 RBM47A0AV96 593 aaKnown RBP18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 ZEB2O60315 1214 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 PWP2Q15269 919 aaKnown RBP18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 DUSP28Q4G0W2 176 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 KIAA1211Q6ZU35 1233 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 ZNF589Q86UQ0 364 aaPredicted RBP18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 USP38Q8NB14 1042 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 NOC4LQ9BVI4 516 aaKnown RBP18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 TRPV6Q9H1D0 765 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 HIPK3Q9H422 1215 aa18.76■□□□□ 0.59
GTF2F1-203ENST00000594213 CXXC1Q9P0U4 656 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms