RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TUBBP07437 444 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 PLCG1P19174 1290 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 CABP7Q86V35 215 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 CSGALNACT2Q8N6G5 542 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 DAGLBQ8NCG7 672 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 TMEM47Q9BQJ4 181 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 AGPAT5Q9NUQ2 364 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 SPATA31A5Q5VU36 1347 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 SPATA31A7Q8IWB4 1347 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 NUTM2BA6NNL0 878 aaPredicted RBP18.46■□□□□ 0.55
LIG1-206ENST00000594067 NUTM2EB1AL46 878 aaPredicted RBP18.46■□□□□ 0.55
LIG1-206ENST00000594067 CCDC122Q5T0U0 273 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 TUBGCP2Q9BSJ2 902 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 HAUS4Q9H6D7 363 aa18.46■□□□□ 0.55
LIG1-206ENST00000594067 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
LIG1-206ENST00000594067 IVLP07476 585 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 TXNRD1Q16881 649 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 LETM2Q2VYF4 491 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 CCDC178Q5BJE1 867 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 WDR93Q6P2C0 686 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 FOXR1Q6PIV2 292 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 FAM71BQ8TC56 605 aa18.46■□□□□ 0.54
LIG1-206ENST00000594067 ATP1A1P05023 1023 aaKnown RBP18.45■□□□□ 0.54
LIG1-206ENST00000594067 SRGNP10124 158 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 DNM2P50570 870 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 PDE4DQ08499 809 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 TRAPPC11Q7Z392 1133 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 EXOC1Q9NV70 894 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 FLT1P17948 1338 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 PALM3A6NDB9 673 aaPredicted RBP18.45■□□□□ 0.54
LIG1-206ENST00000594067 CCNT1O60563 726 aaKnown RBP18.45■□□□□ 0.54
LIG1-206ENST00000594067 SRGAP2O75044 1071 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 PHACTR2O75167 634 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 MYL1P05976 194 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 TRIM21P19474 475 aaKnown RBP18.45■□□□□ 0.54
LIG1-206ENST00000594067 NAPAP54920 295 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 STK4Q13043 487 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 GALNT17Q6IS24 598 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 PTF1AQ7RTS3 328 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
LIG1-206ENST00000594067 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 KLRF2D3W0D1 207 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 PSMD14O00487 310 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 FCER1AP12319 257 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 TM4SF1P30408 202 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 TBC1D8BQ0IIM8 1120 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 ANKRD40Q6AI12 368 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 AMOTL1Q8IY63 956 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 DHTKD1Q96HY7 919 aaPredicted RBP18.44■□□□□ 0.54
LIG1-206ENST00000594067 PCMTD1Q96MG8 357 aaPredicted RBP18.44■□□□□ 0.54
LIG1-206ENST00000594067 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 IRS2Q9Y4H2 1338 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 OR52Z1P0C646 297 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 PRPHP41219 470 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 ASIC1P78348 528 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 HSP90B2PQ58FF3 399 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 P2RX5Q93086 422 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 CNOT6LQ96LI5 555 aaKnown RBP18.44■□□□□ 0.54
LIG1-206ENST00000594067 GPR101Q96P66 508 aaPredicted RBP18.44■□□□□ 0.54
LIG1-206ENST00000594067 TRIM9Q9C026 710 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 RSPH14Q9UHP6 348 aa18.44■□□□□ 0.54
LIG1-206ENST00000594067 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
LIG1-206ENST00000594067 RCCD1A6NED2 376 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 LAD1O00515 517 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 RASA1P20936 1047 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 CCNE1P24864 410 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 TPTE2Q6XPS3 522 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 NOC3LQ8WTT2 800 aaKnown RBP18.43■□□□□ 0.54
LIG1-206ENST00000594067 HPS3Q969F9 1004 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 CAPZA3Q96KX2 299 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 TTYH3Q9C0H2 523 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 NKRFO15226 690 aaKnown RBP eCLIP18.43■□□□□ 0.54
LIG1-206ENST00000594067 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
LIG1-206ENST00000594067 JAKMIP2Q96AA8 810 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 ZFP91Q96JP5 570 aaPredicted RBP18.43■□□□□ 0.54
LIG1-206ENST00000594067 MMS19Q96T76 1030 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 VAT1LQ9HCJ6 419 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 MED4Q9NPJ6 270 aa18.43■□□□□ 0.54
LIG1-206ENST00000594067 ZPR1O75312 459 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 BAG3O95817 575 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 TECP42680 631 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 KRT83P78385 493 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 MEA1Q16626 185 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 WDR66Q8TBY9 1149 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 LACRTQ9GZZ8 138 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
LIG1-206ENST00000594067 SAR1BQ9Y6B6 198 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 SMCO2A6NFE2 343 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.54
LIG1-206ENST00000594067 CCDC47Q96A33 483 aaKnown RBP18.42■□□□□ 0.54
LIG1-206ENST00000594067 ZMYND12Q9H0C1 365 aa18.42■□□□□ 0.54
LIG1-206ENST00000594067 ZNHIT6Q9NWK9 470 aaKnown RBP18.42■□□□□ 0.54
LIG1-206ENST00000594067 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms