RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 DEFB128Q7Z7B8 93 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 ALYREFQ86V81 257 aaKnown RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 FTSJ3Q8IY81 847 aaKnown RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 STK11IPQ8N1F8 1099 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 HLA-CQ95604 372 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 DDRGK1Q96HY6 314 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 AP5M1Q9H0R1 490 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 ALDH8A1Q9H2A2 487 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 CD320Q9NPF0 282 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
SRRM1-221ENST00000593639 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 TCF20Q9UGU0 1960 aaKnown RBP11.03□□□□□ -0.64
SRRM1-221ENST00000593639 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 ZEB2O60315 1214 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 LPXNO60711 386 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 PFKMP08237 780 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 GRB10Q13322 594 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 TAPT1Q6NXT6 567 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 EEPD1Q7L9B9 569 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 FBXO16Q8IX29 292 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-221ENST00000593639 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SRRM1-221ENST00000593639 SEZ6LQ9BYH1 1024 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 PUS7LQ9H0K6 701 aaKnown RBP11.02□□□□□ -0.65
SRRM1-221ENST00000593639 BCL11AQ9H165 835 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 ACAD9Q9H845 621 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 ARPP21Q9UBL0 812 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-221ENST00000593639 CLIP2Q9UDT6 1046 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 FEM1BQ9UK73 627 aa11.02□□□□□ -0.65
SRRM1-221ENST00000593639 COL11A1P12107 1806 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-221ENST00000593639 ZNFX1Q9P2E3 1918 aaKnown RBP11.01□□□□□ -0.65
SRRM1-221ENST00000593639 WDFY4Q6ZS81 3184 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
SRRM1-221ENST00000593639 HERC6Q8IVU3 1022 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
SRRM1-221ENST00000593639 PHOSPHO2Q8TCD6 241 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 SLC9A7Q96T83 725 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.01□□□□□ -0.659e-22■■□□□ 12.3
SRRM1-221ENST00000593639 MKNK2Q9HBH9 465 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 ZNF536O15090 1300 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 TNKSO95271 1327 aa11.01□□□□□ -0.65
SRRM1-221ENST00000593639 ASB14A6NK59 587 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 SBK1Q52WX2 424 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 HSP90AB4PQ58FF6 505 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 IQSEC1Q6DN90 963 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 GMCL1P1Q8NEA9 526 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 MKL1Q969V6 931 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 KIF1BPQ96EK5 621 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
SRRM1-221ENST00000593639 HAUS7Q99871 368 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 COG6Q9Y2V7 657 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 Q9Y3F1 56 aa11□□□□□ -0.65
SRRM1-221ENST00000593639 LCHNA4D1U4 455 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 MINDY4BA8MYZ0 360 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 PRDM1O75626 825 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 IQCF3P0C7M6 154 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 SUPT20HL2P0C7V6 817 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 BMP3P12645 472 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 ACTN1P12814 892 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 ATP5JP18859 108 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 PPP1R13LQ8WUF5 828 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 TRERF1Q96PN7 1200 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
SRRM1-221ENST00000593639 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
SRRM1-221ENST00000593639 PRR33A8MZF0 331 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 TMEM232C9JQI7 657 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 TTLL1O95922 423 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 RFC2P35250 354 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 SNAP25P60880 206 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
SRRM1-221ENST00000593639 MUM1L1Q5H9M0 696 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 KIAA1211Q6ZU35 1233 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 TMCO2Q7Z6W1 182 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-221ENST00000593639 RPAP2Q8IXW5 612 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-221ENST00000593639 GDPD5Q8WTR4 605 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 CHMP4CQ96CF2 233 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 VTA1Q9NP79 307 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 SYNPO2Q9UMS6 1093 aa10.98□□□□□ -0.65
SRRM1-221ENST00000593639 KIF28PB7ZC32 967 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 MYL3P08590 195 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 FDX1P10109 184 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 ALAS1P13196 640 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 STAT2P52630 851 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 DUSP28Q4G0W2 176 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 ZNF444Q8N0Y2 327 aaPredicted RBP10.97□□□□□ -0.65
SRRM1-221ENST00000593639 GJD3Q8N144 294 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 MORC4Q8TE76 937 aa10.97□□□□□ -0.65
SRRM1-221ENST00000593639 MTG1Q9BT17 334 aaPredicted RBP10.97□□□□□ -0.65
SRRM1-221ENST00000593639 FTOQ9C0B1 505 aaKnown RBP eCLIP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms