RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CCSAPQ6IQ19 270 aaPredicted RBP15.59■□□□□ 0.09
H3F3B-213ENST00000593254 MFSD5Q6N075 450 aa15.59■□□□□ 0.09
H3F3B-213ENST00000593254 FAM160B2Q86V87 743 aa15.59■□□□□ 0.09
H3F3B-213ENST00000593254 CPXCR1Q8N123 301 aa15.59■□□□□ 0.09
H3F3B-213ENST00000593254 CHURC1Q8WUH1 139 aa15.59■□□□□ 0.09
H3F3B-213ENST00000593254 RAVER2Q9HCJ3 691 aaKnown RBP15.59■□□□□ 0.09
H3F3B-213ENST00000593254 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
H3F3B-213ENST00000593254 PIEZO1Q92508 2521 aa15.58■□□□□ 0.09
H3F3B-213ENST00000593254 DNAJC25-GNG10A0A024R161 153 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 PCP11498 1178 aaKnown RBP15.58■□□□□ 0.08
H3F3B-213ENST00000593254 AKR1A1P14550 325 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 ACLYP53396 1101 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 HAND2P61296 217 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 MRPS5P82675 430 aaKnown RBP15.58■□□□□ 0.08
H3F3B-213ENST00000593254 ADGRE1Q14246 886 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 RASGRP2Q7LDG7 609 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 KLHDC9Q8NEP7 349 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 NUP133Q8WUM0 1156 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 STAG1Q8WVM7 1258 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 PPM1EQ8WY54 764 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 LENG1Q96BZ8 264 aaPredicted RBP15.58■□□□□ 0.08
H3F3B-213ENST00000593254 UHRF1Q96T88 793 aaPredicted RBP15.58■□□□□ 0.08
H3F3B-213ENST00000593254 PRDM12Q9H4Q4 367 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 STARD7Q9NQZ5 370 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 TOMM22Q9NS69 142 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 DIAPH3Q9NSV4 1193 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 TCP11L1Q9NUJ3 509 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 FBXO40Q9UH90 709 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 GBF1Q92538 1859 aa15.58■□□□□ 0.08
H3F3B-213ENST00000593254 TCF20Q9UGU0 1960 aaKnown RBP15.58■□□□□ 0.08
H3F3B-213ENST00000593254 MOXD2PA6NHM9 499 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 GRXCR1A8MXD5 290 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 HIP1O00291 1037 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 PPIGQ13427 754 aaKnown RBP eCLIP15.57■□□□□ 0.082e-17■□□□□ 8.1
H3F3B-213ENST00000593254 RRP12Q5JTH9 1297 aaKnown RBP15.57■□□□□ 0.08
H3F3B-213ENST00000593254 RCSD1Q6JBY9 416 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 CWC27Q6UX04 472 aaKnown RBP15.57■□□□□ 0.08
H3F3B-213ENST00000593254 KCTD1Q719H9 257 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 TBC1D10CQ8IV04 446 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 MSL3Q8N5Y2 521 aaKnown RBP15.57■□□□□ 0.08
H3F3B-213ENST00000593254 CHST13Q8NET6 341 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 DDX11Q96FC9 970 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 ISY1Q9ULR0 285 aaKnown RBP15.57■□□□□ 0.08
H3F3B-213ENST00000593254 SYNRGQ9UMZ2 1314 aa15.57■□□□□ 0.08
H3F3B-213ENST00000593254 PDE4AP27815 886 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 SLC4A3P48751 1232 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 CDK7P50613 346 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
H3F3B-213ENST00000593254 IKQ13123 557 aaPredicted RBP15.56■□□□□ 0.08
H3F3B-213ENST00000593254 MAMDC4Q6UXC1 1216 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 MFSD6Q6ZSS7 791 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 CHMP4CQ96CF2 233 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 FAM122AQ96E09 287 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 ZNF536O15090 1300 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 SYNGAP1Q96PV0 1343 aa15.56■□□□□ 0.08
H3F3B-213ENST00000593254 ELP1O95163 1332 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 MROH7Q68CQ1 1323 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 TOP1P11387 765 aaKnown RBP15.55■□□□□ 0.08
H3F3B-213ENST00000593254 KCNA10Q16322 511 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 CCDC174Q6PII3 467 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 ZNF467Q7Z7K2 595 aaPredicted RBP15.55■□□□□ 0.08
H3F3B-213ENST00000593254 DCAF4Q8WV16 495 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 TMEM47Q9BQJ4 181 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 RNF41Q9H4P4 317 aaPredicted RBP15.55■□□□□ 0.08
H3F3B-213ENST00000593254 PRR12Q9ULL5 1215 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 CNPY2Q9Y2B0 182 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 LCTP09848 1927 aa15.55■□□□□ 0.08
H3F3B-213ENST00000593254 NEDD4P46934 1319 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 ZNF213O14771 459 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 SNAI1O95863 264 aaPredicted RBP15.54■□□□□ 0.08
H3F3B-213ENST00000593254 GSPT1P15170 499 aaKnown RBP15.54■□□□□ 0.08
H3F3B-213ENST00000593254 CSF2RAP15509 400 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 CST5P28325 142 aaPredicted RBP15.54■□□□□ 0.08
H3F3B-213ENST00000593254 TTC22Q5TAA0 569 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 PSRC1Q6PGN9 363 aaPredicted RBP15.54■□□□□ 0.08
H3F3B-213ENST00000593254 ZNF365Q70YC5 407 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 ANKRD35Q8N283 1001 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 FGD4Q96M96 766 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 AGBL1Q96MI9 1066 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 TTC14Q96N46 770 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 DSCC1Q9BVC3 393 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 ACAD9Q9H845 621 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 HOMER2Q9NSB8 354 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 MTMR7Q9Y216 660 aa15.54■□□□□ 0.08
H3F3B-213ENST00000593254 MYADML2A6NDP7 307 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 DUSP11O75319 330 aaKnown RBP15.53■□□□□ 0.08
H3F3B-213ENST00000593254 NT5C2P49902 561 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 CCDC85BQ15834 202 aaPredicted RBP15.53■□□□□ 0.08
H3F3B-213ENST00000593254 CCDC96Q2M329 555 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 TKFCQ3LXA3 575 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 BTNL9Q6UXG8 535 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 ESR2Q92731 530 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 IL25Q9H293 177 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 RNF146Q9NTX7 359 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 FAM184BQ9ULE4 1060 aa15.53■□□□□ 0.08
H3F3B-213ENST00000593254 PRRC2BQ5JSZ5 2229 aaKnown RBP15.53■□□□□ 0.08
H3F3B-213ENST00000593254 ACRP10323 421 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 PDHBP11177 359 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 RAB30Q15771 203 aa15.52■□□□□ 0.08
H3F3B-213ENST00000593254 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms