RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PRPHP41219 470 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 VAV2P52735 878 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ITIH3Q06033 890 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ERGIC2Q96RQ1 377 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 TSGA10Q9BZW7 698 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 EFCC1Q9HA90 598 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 BICDL2A1A5D9 508 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 PP2D1A8MPX8 630 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 AGPSO00116 658 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ZNF572Q7Z3I7 529 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 MMGT1Q8N4V1 131 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 P2RX5Q93086 422 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 MYH1P12882 1939 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 CCDC194A0A1B0GVG4 234 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 WTIPA6NIX2 430 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 SHOX2O60902 331 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 MYBL2P10244 700 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 GGCXP38435 758 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 CORO7P57737 925 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 GALNT17Q6IS24 598 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 FAM114A1Q8IWE2 563 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 RUBCNQ92622 972 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 IQCDQ96DY2 449 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 CRACR2AQ9BSW2 395 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 PCDHA6Q9UN73 950 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 PCDHA8Q9Y5H6 950 aa16.59■□□□□ 0.25
SMARCA4-219ENST00000592604 ZNF185O15231 689 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 HNRNPH3P31942 346 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 PPP1R2P41236 205 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 KIF5AQ12840 1032 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 MIIPQ5JXC2 388 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 TYW1BQ6NUM6 668 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 ANKRD18AQ8IVF6 992 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 LRRC15Q8TF66 581 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 AENQ8WTP8 325 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 BTG4Q9NY30 223 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 NUTM2BA6NNL0 878 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 NUTM2EB1AL46 878 aaPredicted RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 IDEP14735 1019 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 PRLRP16471 622 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 DGKHQ86XP1 1220 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 CNOT6LQ96LI5 555 aaKnown RBP16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
SMARCA4-219ENST00000592604 ZMYND10O75800 440 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 KLK7P49862 253 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 NT5C2P49902 561 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 ANKRD40Q6AI12 368 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 CREG2Q8IUH2 290 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 AMOTL1Q8IY63 956 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 RIN2Q8WYP3 895 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 FAM184BQ9ULE4 1060 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 JRKLQ9Y4A0 524 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 EXOC5O00471 708 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 ZNF263O14978 683 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 MECOMQ03112 1051 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 COBLL1Q53SF7 1204 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 TRIM58Q8NG06 486 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 AK8Q96MA6 479 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 C7orf25Q9BPX7 421 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 KAT14Q9H8E8 782 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 JADE2Q9NQC1 790 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 SNX12Q9UMY4 172 aa16.57■□□□□ 0.24
SMARCA4-219ENST00000592604 NOP2P46087 812 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 CCDC70Q6NSX1 233 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 MINPP1Q9UNW1 487 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 FLT1P17948 1338 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 CYP2D6P10635 497 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 GNAQP50148 359 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 CYP27A1Q02318 531 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 GRM4Q14833 912 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 PLAGL2Q9UPG8 496 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 MACROD2A1Z1Q3 448 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 C2orf54Q08AI8 447 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 SPA17Q15506 151 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 INF2Q27J81 1249 aa16.56■□□□□ 0.24
SMARCA4-219ENST00000592604 STAG2Q8N3U4 1231 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms