RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 RAG1P15918 1043 aa20.28■□□□□ 0.84
RANBP3-227ENST00000592266 SNAP25P60880 206 aa20.28■□□□□ 0.84
RANBP3-227ENST00000592266 NSMFQ6X4W1 530 aa20.28■□□□□ 0.84
RANBP3-227ENST00000592266 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
RANBP3-227ENST00000592266 KATNBL1Q9H079 304 aa20.28■□□□□ 0.84
RANBP3-227ENST00000592266 TMEM39AQ9NV64 488 aa20.28■□□□□ 0.84
RANBP3-227ENST00000592266 SOWAHBA6NEL2 793 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 ASGR1P07306 291 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 PDHBP11177 359 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 SLC16A2P36021 539 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 TNFAIP2Q03169 654 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 CCDC178Q5BJE1 867 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 FAM109BQ6ICB4 259 aaPredicted RBP20.27■□□□□ 0.84
RANBP3-227ENST00000592266 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.84
RANBP3-227ENST00000592266 Q7L0L9 218 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 VTI1AQ96AJ9 217 aa20.27■□□□□ 0.84
RANBP3-227ENST00000592266 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
RANBP3-227ENST00000592266 FRMPD2Q68DX3 1309 aaPredicted RBP20.27■□□□□ 0.83
RANBP3-227ENST00000592266 LOC102724159A0A0B4J2E5 919 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 MYADML2A6NDP7 307 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 ADCY6O43306 1168 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 PWP2Q15269 919 aaKnown RBP20.26■□□□□ 0.83
RANBP3-227ENST00000592266 SHHQ15465 462 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 TTBK2Q6IQ55 1244 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 GPCPD1Q9NPB8 672 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 MTMR10Q9NXD2 777 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 STXBP5LQ9Y2K9 1186 aa20.26■□□□□ 0.83
RANBP3-227ENST00000592266 MCM3APO60318 1980 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 A0A0U1RQG5 324 aaPredicted RBP20.25■□□□□ 0.83
RANBP3-227ENST00000592266 NKX3-2P78367 333 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 ZNF543Q08ER8 600 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 GPATCH4Q5T3I0 446 aaKnown RBP20.25■□□□□ 0.83
RANBP3-227ENST00000592266 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 AP5M1Q9H0R1 490 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 VTA1Q9NP79 307 aa20.25■□□□□ 0.83
RANBP3-227ENST00000592266 ZEB2O60315 1214 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 SNHG28P0DPA3 235 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 FPGSQ05932 587 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 FAAP100Q0VG06 881 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 C9orf50Q5SZB4 431 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 IQSEC1Q6DN90 963 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 TLK2Q86UE8 772 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 MPHOSPH6Q99547 160 aaKnown RBP20.24■□□□□ 0.83
RANBP3-227ENST00000592266 DSCC1Q9BVC3 393 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 NEDD4P46934 1319 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 WDR19Q8NEZ3 1342 aa20.24■□□□□ 0.83
RANBP3-227ENST00000592266 ARVCFO00192 962 aa20.23■□□□□ 0.83
RANBP3-227ENST00000592266 TLR3O15455 904 aaKnown RBP20.23■□□□□ 0.83
RANBP3-227ENST00000592266 CABYRO75952 493 aa20.23■□□□□ 0.83
RANBP3-227ENST00000592266 IMMTQ16891 758 aaKnown RBP20.23■□□□□ 0.83
RANBP3-227ENST00000592266 ZNF697Q5TEC3 545 aa20.23■□□□□ 0.83
RANBP3-227ENST00000592266 SLC17A8Q8NDX2 589 aa20.23■□□□□ 0.83
RANBP3-227ENST00000592266 GNEQ9Y223 722 aaKnown RBP20.23■□□□□ 0.83
RANBP3-227ENST00000592266 Q9Y3F1 56 aa20.23■□□□□ 0.83
RANBP3-227ENST00000592266 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.22■□□□□ 0.83
RANBP3-227ENST00000592266 PTPDC1A2A3K4 754 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 ITGB8P26012 769 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 CDK7P50613 346 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 BAATQ14032 418 aaPredicted RBP20.22■□□□□ 0.83
RANBP3-227ENST00000592266 FBXO16Q8IX29 292 aaPredicted RBP20.22■□□□□ 0.83
RANBP3-227ENST00000592266 MORC4Q8TE76 937 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 SEZ6LQ9BYH1 1024 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 ASTN1O14525 1302 aa20.22■□□□□ 0.83
RANBP3-227ENST00000592266 NFIBO00712 420 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 KDM4AO75164 1064 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 TIMP1P01033 207 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 ALDH5A1P51649 535 aaPredicted RBP20.21■□□□□ 0.83
RANBP3-227ENST00000592266 IRX5P78411 483 aaPredicted RBP20.21■□□□□ 0.83
RANBP3-227ENST00000592266 SMAD3P84022 425 aaKnown RBP20.21■□□□□ 0.83
RANBP3-227ENST00000592266 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
RANBP3-227ENST00000592266 EEPD1Q7L9B9 569 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 RNPC3Q96LT9 517 aaKnown RBP20.21■□□□□ 0.83
RANBP3-227ENST00000592266 ZKSCAN3Q9BRR0 538 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 KAT14Q9H8E8 782 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 TBX21Q9UL17 535 aa20.21■□□□□ 0.83
RANBP3-227ENST00000592266 COL6A3P12111 3177 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 B4DLN1 442 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 CTAGE5O15320 804 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 DYNC1LI2O43237 492 aaPredicted RBP20.2■□□□□ 0.82
RANBP3-227ENST00000592266 SMPD1P17405 629 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 MRPL12P52815 198 aaKnown RBP20.2■□□□□ 0.82
RANBP3-227ENST00000592266 BEX3Q00994 111 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 TAPT1Q6NXT6 567 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 RNF207Q6ZRF8 634 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 KIAA1211Q6ZU35 1233 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 PNMA1Q8ND90 353 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 KRT23Q9C075 422 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 CNNM2Q9H8M5 875 aa20.2■□□□□ 0.82
RANBP3-227ENST00000592266 PPIGQ13427 754 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■■■□□ 18.4
RANBP3-227ENST00000592266 MFSD5Q6N075 450 aa20.19■□□□□ 0.82
RANBP3-227ENST00000592266 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
RANBP3-227ENST00000592266 FAM126BQ8IXS8 530 aa20.19■□□□□ 0.82
RANBP3-227ENST00000592266 ZSCAN10Q96SZ4 725 aaPredicted RBP20.19■□□□□ 0.82
RANBP3-227ENST00000592266 MAF1Q9H063 256 aa20.19■□□□□ 0.82
RANBP3-227ENST00000592266 PDGFCQ9NRA1 345 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms