RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 USP17L11C9JVI0 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L18D6R9N7 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L22D6RA61 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L19D6RCP7 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L20D6RJB6 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 FLOT1O75955 427 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L24Q0WX57 530 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 NONOQ15233 471 aaKnown RBP eCLIP13□□□□□ -0.33
TUBD1-211ENST00000591548 SH3D19Q5HYK7 790 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 USP17L6PQ6QN14 398 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 CCAR1Q8IX12 1150 aaKnown RBP13□□□□□ -0.33
TUBD1-211ENST00000591548 JMYQ8N9B5 988 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
TUBD1-211ENST00000591548 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
TUBD1-211ENST00000591548 MORC2Q9Y6X9 1032 aaPredicted RBP13□□□□□ -0.33
TUBD1-211ENST00000591548 MEIS2O14770 477 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 EDIL3O43854 480 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 NR1I2O75469 434 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 PTPREP23469 700 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 MCM7P33993 719 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 GRIN1Q05586 938 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 PPATQ06203 517 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 LDLRAD1Q5T700 205 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 LDHDQ86WU2 507 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
TUBD1-211ENST00000591548 RBM46Q8TBY0 533 aaKnown RBP12.99□□□□□ -0.33
TUBD1-211ENST00000591548 TBCKQ8TEA7 893 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 GLT8D2Q9H1C3 349 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 SLC38A10Q9HBR0 1119 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
TUBD1-211ENST00000591548 SPDYE5A6NIY4 337 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 IRF6O14896 467 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 CUTAO60888 179 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ICAM1P05362 532 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 CMA1P23946 247 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 TRAF1Q13077 416 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 PTGDRQ13258 359 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 SNW1Q13573 536 aaKnown RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ARMC9Q7Z3E5 817 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 C4orf32Q8N8J7 132 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 FSIP1Q8NA03 581 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ENGASEQ8NFI3 743 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 MRPS27Q92552 414 aaKnown RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 AGBL1Q96MI9 1066 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 P2RX7Q99572 595 aaKnown RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 DACT1Q9NYF0 836 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 TMOD4Q9NZQ9 345 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 PARP14Q460N5 1801 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 BMP15O95972 392 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 GSE1Q14687 1217 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 CATSPERGQ6ZRH7 1159 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 NEK8Q86SG6 692 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ZNF526Q8TF50 670 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ATG4CQ96DT6 458 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 ZNF408Q9H9D4 720 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 RLFQ13129 1914 aa12.98□□□□□ -0.33
TUBD1-211ENST00000591548 PTPRFP10586 1907 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 VWA5AO00534 786 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 NDUFA8P51970 172 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 FAM160A1Q05DH4 1040 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 LETM2Q2VYF4 491 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 CCDC183Q5T5S1 534 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 FMR1NBQ8N0W7 255 aaPredicted RBP12.97□□□□□ -0.33
TUBD1-211ENST00000591548 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 ADAMTS5Q9UNA0 930 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 KCNH4Q9UQ05 1017 aa12.97□□□□□ -0.33
TUBD1-211ENST00000591548 ABCB11O95342 1321 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 A0A0G2JLL6 359 aaPredicted RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 CXCL11O14625 94 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 CCNT1O60563 726 aaKnown RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 PFKFB1P16118 471 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 HOXA13P31271 388 aaPredicted RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 DSG3P32926 999 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 PPIL2Q13356 520 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 COG2Q14746 738 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 IL17AQ16552 155 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 TREML2Q5T2D2 321 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 CCDC73Q6ZRK6 1079 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 PRRT2Q7Z6L0 340 aaPredicted RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 CPXCR1Q8N123 301 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
TUBD1-211ENST00000591548 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
TUBD1-211ENST00000591548 FERMT2Q96AC1 680 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms