RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 DYNC1LI2O43237 492 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-211ENST00000591547 PRDM1O75626 825 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 SMPD1P17405 629 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 DEFB128Q7Z7B8 93 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
RETREG3-211ENST00000591547 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 GNEQ9Y223 722 aaKnown RBP11.75□□□□□ -0.53
RETREG3-211ENST00000591547 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-211ENST00000591547 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 LCTP09848 1927 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 PRRC2BQ5JSZ5 2229 aaKnown RBP11.75□□□□□ -0.53
RETREG3-211ENST00000591547 PTPRSQ13332 1948 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 NCOR1O75376 2440 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 ATP2A1O14983 1001 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 CA3P07451 260 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 CYP2C9P11712 490 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 NKX3-2P78367 333 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 FSCN1Q16658 493 aaKnown RBP11.74□□□□□ -0.53
RETREG3-211ENST00000591547 TLK2Q86UE8 772 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 FBXO16Q8IX29 292 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-211ENST00000591547 SIRT2Q8IXJ6 389 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 FAM133AQ8N9E0 248 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 C1QTNF1Q9BXJ1 281 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-211ENST00000591547 MTIF3Q9H2K0 278 aaKnown RBP11.74□□□□□ -0.53
RETREG3-211ENST00000591547 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 TRMT13Q9NUP7 481 aaKnown RBP11.74□□□□□ -0.53
RETREG3-211ENST00000591547 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 PCDHA11Q9Y5I1 949 aa11.74□□□□□ -0.53
RETREG3-211ENST00000591547 IGKV6D-41A0A0C4DH26 115 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 GSG1L2A8MUP6 293 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 ERC2O15083 957 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 ZNF536O15090 1300 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 TLL1O43897 1013 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 HMMRO75330 724 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 ATP2A2P16615 1042 aaKnown RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 COL4A4P53420 1690 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 AAMPQ13685 434 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 TAPT1Q6NXT6 567 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 RPAP2Q8IXW5 612 aaPredicted RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 ARNTL2Q8WYA1 636 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 KIF1BPQ96EK5 621 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 CEP95Q96GE4 821 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 HAUS7Q99871 368 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 AP5M1Q9H0R1 490 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 C11orf16Q9NQ32 467 aa11.73□□□□□ -0.53
RETREG3-211ENST00000591547 A1CFQ9NQ94 594 aaKnown RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 ISY1Q9ULR0 285 aaKnown RBP11.73□□□□□ -0.53
RETREG3-211ENST00000591547 TMEM232C9JQI7 657 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 SMARCA5O60264 1052 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 NEFLP07196 543 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 ATP5JP18859 108 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 UBE3CQ15386 1083 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 SLFN13Q68D06 897 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 CHST13Q8NET6 341 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 EPB41L4AQ9HCS5 686 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 CD320Q9NPF0 282 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 RNF146Q9NTX7 359 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
RETREG3-211ENST00000591547 FEM1BQ9UK73 627 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
RETREG3-211ENST00000591547 BMP3P12645 472 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 ALAS1P13196 640 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 TAP1Q03518 808 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 SBK1Q52WX2 424 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 TMEM67Q5HYA8 995 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 RPUSD2Q8IZ73 545 aaKnown RBP11.71□□□□□ -0.53
RETREG3-211ENST00000591547 TRERF1Q96PN7 1200 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
RETREG3-211ENST00000591547 ACAD9Q9H845 621 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 FBXO40Q9UH90 709 aa11.71□□□□□ -0.53
RETREG3-211ENST00000591547 CABYRO75952 493 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 MYL3P08590 195 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 GRB10Q13322 594 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 TMEM31Q5JXX7 168 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 OSBP2Q969R2 916 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 MKL1Q969V6 931 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 MTMR4Q9NYA4 1195 aa11.7□□□□□ -0.54
RETREG3-211ENST00000591547 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 TNKSO95271 1327 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 LCHNA4D1U4 455 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 M0R2C6 588 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 GTPBP6O43824 516 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-211ENST00000591547 POU3F3P20264 500 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-211ENST00000591547 MCCP23508 829 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 OAZ1P54368 228 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 AAK1Q2M2I8 961 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 KCTD1Q719H9 257 aa11.69□□□□□ -0.54
RETREG3-211ENST00000591547 ZNF444Q8N0Y2 327 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms