RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SMCR8Q8TEV9 937 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 DAGLAQ9Y4D2 1042 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 GAS7O60861 476 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
RETREG3-208ENST00000589797 GRIK5Q16478 980 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 KMT5BQ4FZB7 885 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 KRT222Q8N1A0 295 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 TXLNBQ8N3L3 684 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 VGLL2Q8N8G2 317 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
RETREG3-208ENST00000589797 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 MAGEA1P43355 309 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 CYP2J2P51589 502 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 TRIML1Q8N9V2 468 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 CCDC113Q9H0I3 377 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 PI4KBQ9UBF8 816 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 ARHGEF35A5YM69 484 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 KRT13P13646 458 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 PLA2G4DQ86XP0 818 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 TMTC1Q8IUR5 882 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 ENGASEQ8NFI3 743 aa16.22■□□□□ 0.19
RETREG3-208ENST00000589797 ENOX1Q8TC92 643 aaKnown RBP16.22■□□□□ 0.19
RETREG3-208ENST00000589797 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
RETREG3-208ENST00000589797 STXBP4Q6ZWJ1 553 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 PANK4Q9NVE7 773 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 GJC1P36383 396 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 FAM26FQ5R3K3 315 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 JAKMIP2Q96AA8 810 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 AMNQ9BXJ7 453 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 POLLQ9UGP5 575 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 JCADQ9P266 1359 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 EEF2P13639 858 aaKnown RBP16.21■□□□□ 0.19
RETREG3-208ENST00000589797 TRAPPC10P48553 1259 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 ARHGAP44Q17R89 818 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 CC2D2BQ6DHV5 1058 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
RETREG3-208ENST00000589797 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 CNOT6LQ96LI5 555 aaKnown RBP16.21■□□□□ 0.19
RETREG3-208ENST00000589797 IRX2Q9BZI1 471 aaPredicted RBP16.21■□□□□ 0.19
RETREG3-208ENST00000589797 DISC1Q9NRI5 854 aa16.21■□□□□ 0.19
RETREG3-208ENST00000589797 H7C1D1 291 aa16.21■□□□□ 0.18
RETREG3-208ENST00000589797 FLOT1O75955 427 aa16.21■□□□□ 0.18
RETREG3-208ENST00000589797 PRCPP42785 496 aa16.21■□□□□ 0.18
RETREG3-208ENST00000589797 EARS2Q5JPH6 523 aaKnown RBP16.21■□□□□ 0.18
RETREG3-208ENST00000589797 BAG6P46379 1132 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 FAM107BQ9H098 131 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 EPC1Q9H2F5 836 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 WDR19Q8NEZ3 1342 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 CLIC2O15247 247 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 BUB1O43683 1085 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 ERCC5P28715 1186 aaPredicted RBP16.2■□□□□ 0.18
RETREG3-208ENST00000589797 MTF1Q14872 753 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 NTRK3Q16288 839 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 ASPRV1Q53RT3 343 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
RETREG3-208ENST00000589797 DPH6Q7L8W6 267 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 TMEM60Q9H2L4 133 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 GOLGA6L10A6NI86 522 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 GYS1P13807 737 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 TOB1P50616 345 aaPredicted RBP16.2■□□□□ 0.18
RETREG3-208ENST00000589797 KRT31Q15323 416 aa16.2■□□□□ 0.18
RETREG3-208ENST00000589797 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
RETREG3-208ENST00000589797 NAPGQ99747 312 aaPredicted RBP16.2■□□□□ 0.18
RETREG3-208ENST00000589797 ECE2O60344 883 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 MRPS25P82663 173 aaKnown RBP16.19■□□□□ 0.18
RETREG3-208ENST00000589797 FLAD1Q8NFF5 587 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 SH2D3AQ9BRG2 576 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 CCDC94Q9BW85 323 aaPredicted RBP16.19■□□□□ 0.18
RETREG3-208ENST00000589797 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 PICK1Q9NRD5 415 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 FLT1P17948 1338 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 EXOC3O60645 756 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 BMP3P12645 472 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 RASA1P20936 1047 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 NFIAQ12857 509 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 RC3H1Q5TC82 1133 aaKnown RBP16.19■□□□□ 0.18
RETREG3-208ENST00000589797 PIGOQ8TEQ8 1089 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 CCDC17Q96LX7 622 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 ZMYND15Q9H091 742 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 ADAM9Q13443 819 aa16.19■□□□□ 0.18
RETREG3-208ENST00000589797 EPN1Q9Y6I3 576 aaPredicted RBP16.19■□□□□ 0.18
RETREG3-208ENST00000589797 ORC4O43929 436 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
RETREG3-208ENST00000589797 LLGL1Q15334 1064 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 ARMCX5Q6P1M9 558 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms