RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CEP250Q9BV73 2442 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 H0Y858 1186 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 BAIAP3O94812 1187 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 IQCF3P0C7M6 154 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 RFC2P35250 354 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 GPNMBQ14956 572 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 FSCN1Q16658 493 aaKnown RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 TMEM63BQ5T3F8 832 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 ARMCX2Q7L311 632 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 TLK2Q86UE8 772 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 SUGP1Q8IWZ8 645 aaKnown RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 MAGEB6Q8N7X4 407 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 ATOH1Q92858 354 aaPredicted RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 C17orf80Q9BSJ5 609 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 VCPKMTQ9H867 229 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 TLR9Q9NR96 1032 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 SNRKQ9NRH2 765 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 TRPC6Q9Y210 931 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 TMX2Q9Y320 296 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 DDX49Q9Y6V7 483 aaKnown RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 EP300Q09472 2414 aaPredicted RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 TNKSO95271 1327 aa7.44□□□□□ -1.22
VPS25-204ENST00000589577 BAZ2AQ9UIF9 1905 aaKnown RBP7.44□□□□□ -1.22
VPS25-204ENST00000589577 WDR46O15213 610 aaKnown RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 GJB5O95377 273 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 CYP2E1P05181 493 aaPredicted RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 HNRNPUQ00839 825 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS25-204ENST00000589577 TNFAIP2Q03169 654 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 DLX2Q07687 328 aaPredicted RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 PKN1Q16512 942 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 CCDC184Q52MB2 194 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 TCEAL5Q5H9L2 206 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 CCDC144CPQ8IYA2 1237 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 MRPL50Q8N5N7 158 aaKnown RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 MIGA1Q8NAN2 632 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS25-204ENST00000589577 PPP1R13LQ8WUF5 828 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 MRPL38Q96DV4 380 aaKnown RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 ASIC4Q96FT7 647 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 NEUROD6Q96NK8 337 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 CNTNAP3BQ96NU0 1288 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 SEZ6LQ9BYH1 1024 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 CNTNAP3Q9BZ76 1288 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
VPS25-204ENST00000589577 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 AKAP2Q9Y2D5 859 aa7.43□□□□□ -1.22
VPS25-204ENST00000589577 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 MPHOSPH10O00566 681 aaKnown RBP7.42□□□□□ -1.22
VPS25-204ENST00000589577 MBTPS2O43462 519 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 SMPD1P17405 629 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 COPB2P35606 906 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 NBL1P41271 181 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 ZXDAP98168 799 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 CLUL1Q15846 466 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 CTC1Q2NKJ3 1217 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 SNRNP48Q6IEG0 339 aaKnown RBP7.42□□□□□ -1.22
VPS25-204ENST00000589577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS25-204ENST00000589577 TTC6Q86TZ1 520 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 FBXO22Q8NEZ5 403 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 DDX11Q96FC9 970 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 YTHDC1Q96MU7 727 aaKnown RBP7.42□□□□□ -1.22
VPS25-204ENST00000589577 TEX13BQ9BXU2 312 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 FTOQ9C0B1 505 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS25-204ENST00000589577 FAM50BQ9Y247 325 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 PTPRCP08575 1304 aa7.42□□□□□ -1.22
VPS25-204ENST00000589577 SPTBN2O15020 2390 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 TBX10O75333 385 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 SUPT20HL2P0C7V6 817 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 UBTFL1P0CB47 393 aaPredicted RBP7.41□□□□□ -1.22
VPS25-204ENST00000589577 CYP7A1P22680 504 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 AVPR2P30518 371 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 USP5P45974 858 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 KCNJ6P48051 423 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 PURAQ00577 322 aaKnown RBP7.41□□□□□ -1.22
VPS25-204ENST00000589577 CNTN2Q02246 1040 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 ICA1Q05084 483 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 TIGD5Q53EQ6 642 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 EP400NLQ6ZTU2 488 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 TMEM179Q6ZVK1 233 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 RPAINQ86UA6 219 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 BANK1Q8NDB2 785 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 RMDN1Q96DB5 314 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 CTAGE1Q96RT6 745 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 POP1Q99575 1024 aaKnown RBP7.41□□□□□ -1.22
VPS25-204ENST00000589577 RAD9AQ99638 391 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 ZBED2Q9BTP6 218 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 PDGFCQ9NRA1 345 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 CLDND1Q9NY35 253 aa7.41□□□□□ -1.22
VPS25-204ENST00000589577 MYH4Q9Y623 1939 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 ASPMQ8IZT6 3477 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 STXBP3O00186 592 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 DYNC1LI2O43237 492 aaPredicted RBP7.4□□□□□ -1.22
VPS25-204ENST00000589577 PDGFBP01127 241 aaPredicted RBP7.4□□□□□ -1.22
VPS25-204ENST00000589577 UQCRFS1P1P0C7P4 283 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 CYP2D6P10635 497 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 AKR1B1P15121 316 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 ZAP70P43403 619 aa7.4□□□□□ -1.22
VPS25-204ENST00000589577 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms