RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 BRAPQ7Z569 592 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 TNFRSF25Q93038 417 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 PSTPIP2Q9H939 334 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 M0R2N6 131 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 HERVK_113P62684 666 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 DNM1Q05193 864 aaKnown RBP28.37■■■□□ 2.13
RFX1-205ENST00000589239 PTPN18Q99952 460 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 RIC8AQ9NPQ8 531 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 ZNF214Q9UL59 606 aaPredicted RBP28.37■■■□□ 2.13
RFX1-205ENST00000589239 PEX10O60683 326 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 BAG4O95429 457 aaKnown RBP28.36■■■□□ 2.13
RFX1-205ENST00000589239 OSBPP22059 807 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 TRAF1Q13077 416 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 CUL5Q93034 780 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 PCDHA6Q9UN73 950 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 PCDHA8Q9Y5H6 950 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 FAM205CA6NFA0 338 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 FAM155AB1AL88 458 aaPredicted RBP28.36■■■□□ 2.13
RFX1-205ENST00000589239 PDHXO00330 501 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 OPLAHO14841 1288 aa28.36■■■□□ 2.13
RFX1-205ENST00000589239 CYP2C8P10632 490 aa28.35■■■□□ 2.13
RFX1-205ENST00000589239 MYSM1Q5VVJ2 828 aa28.35■■■□□ 2.13
RFX1-205ENST00000589239 LBX2Q6XYB7 198 aa28.35■■■□□ 2.13
RFX1-205ENST00000589239 HHIPL1Q96JK4 782 aa28.35■■■□□ 2.13
RFX1-205ENST00000589239 BIN2Q9UBW5 565 aaPredicted RBP28.35■■■□□ 2.13
RFX1-205ENST00000589239 COL11A1P12107 1806 aaPredicted RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 ALAS1P13196 640 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 MRPL12P52815 198 aaKnown RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 UBE2SQ16763 222 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 PAXIP1Q6ZW49 1069 aaPredicted RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 ANKRD23Q86SG2 305 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 REXO1Q8N1G1 1221 aaKnown RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 BICD2Q8TD16 824 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 CCDC102AQ96A19 550 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 RRAGDQ9NQL2 400 aaPredicted RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 HOMER2Q9NSB8 354 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 RIPK3Q9Y572 518 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 ABCB11O95342 1321 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 OAZ1P54368 228 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 GRM1Q13255 1194 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 PLS1Q14651 629 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 SNRNP48Q6IEG0 339 aaKnown RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 USP17L6PQ6QN14 398 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 PIK3AP1Q6ZUJ8 805 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 TMEM260Q9NX78 707 aa28.34■■■□□ 2.13
RFX1-205ENST00000589239 MRPL11Q9Y3B7 192 aaKnown RBP28.34■■■□□ 2.13
RFX1-205ENST00000589239 APLP1P51693 650 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 BTBD7Q9P203 1132 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 PNMA3Q9UL41 463 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
RFX1-205ENST00000589239 MANSC4A6NHS7 340 aaPredicted RBP28.33■■■□□ 2.13
RFX1-205ENST00000589239 JAKMIP3Q5VZ66 844 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 CLEC17AQ6ZS10 378 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 PAGR1Q9BTK6 254 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 SLC45A1Q9Y2W3 748 aa28.33■■■□□ 2.13
RFX1-205ENST00000589239 ATP2A1O14983 1001 aa28.32■■■□□ 2.12
RFX1-205ENST00000589239 NCLP19338 710 aaKnown RBP28.32■■■□□ 2.12
RFX1-205ENST00000589239 CYP4F22Q6NT55 531 aa28.32■■■□□ 2.12
RFX1-205ENST00000589239 GBP4Q96PP9 640 aa28.32■■■□□ 2.12
RFX1-205ENST00000589239 TEX13BQ9BXU2 312 aa28.32■■■□□ 2.12
RFX1-205ENST00000589239 FTOQ9C0B1 505 aaKnown RBP eCLIP28.32■■■□□ 2.12
RFX1-205ENST00000589239 TFIP11Q9UBB9 837 aaKnown RBP28.32■■■□□ 2.12
RFX1-205ENST00000589239 MEIS2O14770 477 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 MB21D1Q8N884 522 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 TBC1D5Q92609 795 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 CREBZFQ9NS37 354 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 CNPY2Q9Y2B0 182 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 STAT3P40763 770 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 CLK2P49760 499 aaKnown RBP28.31■■■□□ 2.12
RFX1-205ENST00000589239 MUM1L1Q5H9M0 696 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 PGBD1Q96JS3 809 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 GLT8D2Q9H1C3 349 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 PNMA2Q9UL42 364 aa28.31■■■□□ 2.12
RFX1-205ENST00000589239 CCDC194A0A1B0GVG4 234 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 NFIBO00712 420 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 HOXA13P31271 388 aaPredicted RBP28.3■■■□□ 2.12
RFX1-205ENST00000589239 CLEC4DQ8WXI8 215 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 TRERF1Q96PN7 1200 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 TXNRD2Q9NNW7 524 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 A0A0G2JMZ2 1700 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 CFBP00751 764 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 CEBPZQ03701 1054 aaKnown RBP28.3■■■□□ 2.12
RFX1-205ENST00000589239 SMCR8Q8TEV9 937 aaPredicted RBP28.3■■■□□ 2.12
RFX1-205ENST00000589239 USP28Q96RU2 1077 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 ZIC5Q96T25 663 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 GDPD2Q9HCC8 539 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 RBPJLQ9UBG7 517 aa28.3■■■□□ 2.12
RFX1-205ENST00000589239 IGF2BP3O00425 579 aaKnown RBP eCLIP28.29■■■□□ 2.12
RFX1-205ENST00000589239 CNMDO75829 334 aa28.29■■■□□ 2.12
RFX1-205ENST00000589239 TOB1P50616 345 aaPredicted RBP28.29■■■□□ 2.12
RFX1-205ENST00000589239 KRT85P78386 507 aa28.28■■■□□ 2.12
RFX1-205ENST00000589239 RNF146Q9NTX7 359 aa28.28■■■□□ 2.12
RFX1-205ENST00000589239 ATP2B1P20020 1258 aa28.28■■■□□ 2.12
RFX1-205ENST00000589239 SPATC1LQ9H0A9 340 aa28.28■■■□□ 2.12
RFX1-205ENST00000589239 FIBPO43427 364 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 KRT25Q7Z3Z0 450 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 ZNF396Q96N95 335 aaPredicted RBP28.27■■■□□ 2.12
RFX1-205ENST00000589239 TCHHQ07283 1943 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 PIK3CDO00329 1044 aa28.27■■■□□ 2.12
RFX1-205ENST00000589239 INF2Q27J81 1249 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms