RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 ERCC3P19447 782 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 FOSBP53539 338 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 HMGN5P82970 282 aaKnown RBP23.11■■□□□ 1.29
DNMT1-216ENST00000588952 JMYQ8N9B5 988 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 ALG1Q9BT22 464 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 EFCC1Q9HA90 598 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 RNF146Q9NTX7 359 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 BARHL2Q9NY43 387 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 VPS54Q9P1Q0 977 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 SMC3Q9UQE7 1217 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 ABCB11O95342 1321 aa23.1■■□□□ 1.29
DNMT1-216ENST00000588952 CAP1Q01518 475 aa23.1■■□□□ 1.29
DNMT1-216ENST00000588952 NCAPG2Q86XI2 1143 aa23.1■■□□□ 1.29
DNMT1-216ENST00000588952 TRERF1Q96PN7 1200 aa23.1■■□□□ 1.29
DNMT1-216ENST00000588952 NFIBO00712 420 aa23.09■■□□□ 1.29
DNMT1-216ENST00000588952 ADAMTS3O15072 1205 aa23.09■■□□□ 1.29
DNMT1-216ENST00000588952 ECM2O94769 699 aaPredicted RBP23.09■■□□□ 1.29
DNMT1-216ENST00000588952 CTGFP29279 349 aa23.09■■□□□ 1.29
DNMT1-216ENST00000588952 SLC25A27O95847 323 aa23.08■■□□□ 1.29
DNMT1-216ENST00000588952 NAPAP54920 295 aa23.08■■□□□ 1.29
DNMT1-216ENST00000588952 TKFCQ3LXA3 575 aa23.08■■□□□ 1.29
DNMT1-216ENST00000588952 SHCBP1Q8NEM2 672 aa23.08■■□□□ 1.29
DNMT1-216ENST00000588952 TBC1D5Q92609 795 aa23.08■■□□□ 1.29
DNMT1-216ENST00000588952 hCG_1984214I3L0E3 225 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 GPR25O00155 361 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 CCNA1P78396 465 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 ZNF713Q8N859 430 aaPredicted RBP23.07■■□□□ 1.28
DNMT1-216ENST00000588952 WASF1Q92558 559 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 ARHGAP39Q9C0H5 1083 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 PNMA2Q9UL42 364 aa23.07■■□□□ 1.28
DNMT1-216ENST00000588952 MRPL11Q9Y3B7 192 aaKnown RBP23.07■■□□□ 1.28
DNMT1-216ENST00000588952 PPP1R18Q6NYC8 613 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 CHST13Q8NET6 341 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 BEGAINQ9BUH8 593 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 ACAD9Q9H845 621 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 KCNJ14Q9UNX9 436 aa23.06■■□□□ 1.28
DNMT1-216ENST00000588952 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
DNMT1-216ENST00000588952 HSP90AA1P07900 732 aaKnown RBP23.05■■□□□ 1.28
DNMT1-216ENST00000588952 COPB2P35606 906 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 LACTBP83111 547 aaPredicted RBP23.05■■□□□ 1.28
DNMT1-216ENST00000588952 GUCY1B3Q02153 619 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 SP3Q02447 781 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 NPY5RQ15761 445 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 WDR78Q5VTH9 848 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.05■■□□□ 1.28
DNMT1-216ENST00000588952 GPR142Q7Z601 462 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 MROH8Q9H579 483 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 SH3GLB2Q9NR46 395 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 PLXNB2O15031 1838 aa23.05■■□□□ 1.28
DNMT1-216ENST00000588952 TRAF1Q13077 416 aa23.04■■□□□ 1.28
DNMT1-216ENST00000588952 SLC30A10Q6XR72 485 aa23.04■■□□□ 1.28
DNMT1-216ENST00000588952 PHF20Q9BVI0 1012 aa23.04■■□□□ 1.28
DNMT1-216ENST00000588952 A1CFQ9NQ94 594 aaKnown RBP23.04■■□□□ 1.28
DNMT1-216ENST00000588952 MGAMO43451 1857 aa23.04■■□□□ 1.28
DNMT1-216ENST00000588952 ESYT2A0FGR8 921 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 SMCO2A6NFE2 343 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 MAPK4P31152 587 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 UBE2SQ16763 222 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 KRT40Q6A162 431 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 NSMFQ6X4W1 530 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 PLEKHH3Q7Z736 793 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 CD99L2Q8TCZ2 262 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 ZNF296Q8WUU4 475 aaPredicted RBP23.03■■□□□ 1.28
DNMT1-216ENST00000588952 C8orf76Q96K31 380 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 TRIM47Q96LD4 638 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 ZMYND12Q9H0C1 365 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 FBXO40Q9UH90 709 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 LCTP09848 1927 aa23.03■■□□□ 1.28
DNMT1-216ENST00000588952 MEIS2O14770 477 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 HOXA13P31271 388 aaPredicted RBP23.02■■□□□ 1.28
DNMT1-216ENST00000588952 GHRHRQ02643 423 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 NOM1Q5C9Z4 860 aaKnown RBP23.02■■□□□ 1.28
DNMT1-216ENST00000588952 USP17L6PQ6QN14 398 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 CCDC148Q8NFR7 591 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 PURBQ96QR8 312 aaKnown RBP23.02■■□□□ 1.28
DNMT1-216ENST00000588952 MMP19Q99542 508 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 PSTPIP2Q9H939 334 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 RIC8AQ9NPQ8 531 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 COL20A1Q9P218 1284 aa23.02■■□□□ 1.28
DNMT1-216ENST00000588952 FOXN1O15353 648 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 CFBP00751 764 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 PTPREP23469 700 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 PSMC4P43686 418 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 HSD17B4P51659 736 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 ADCY7P51828 1080 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 NLRP5P59047 1200 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 BAATQ14032 418 aaPredicted RBP23.01■■□□□ 1.27
DNMT1-216ENST00000588952 CCAR1Q8IX12 1150 aaKnown RBP23.01■■□□□ 1.27
DNMT1-216ENST00000588952 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 FBXO18Q8NFZ0 1043 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 OXER1Q8TDS5 423 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 CCDC12Q8WUD4 166 aaPredicted RBP23.01■■□□□ 1.27
DNMT1-216ENST00000588952 CYP39A1Q9NYL5 469 aa23.01■■□□□ 1.27
DNMT1-216ENST00000588952 FKTNO75072 461 aa23■■□□□ 1.27
DNMT1-216ENST00000588952 HSPA1AP0DMV8 641 aaKnown RBP23■■□□□ 1.27
DNMT1-216ENST00000588952 HSPA1BP0DMV9 641 aaKnown RBP23■■□□□ 1.27
DNMT1-216ENST00000588952 RPS6P62753 249 aaKnown RBP23■■□□□ 1.27
DNMT1-216ENST00000588952 GRB14Q14449 540 aa23■■□□□ 1.27
DNMT1-216ENST00000588952 LARP1BQ659C4 914 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms