RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 B4GALT4O60513 344 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 PRDM1O75626 825 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 BMP3P12645 472 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 BMP1P13497 986 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 TFF2Q03403 129 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 FSCN1Q16658 493 aaKnown RBP18.23■□□□□ 0.51
IFT20-216ENST00000588477 GIMAP6Q6P9H5 292 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 SCLYQ96I15 445 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
IFT20-216ENST00000588477 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
IFT20-216ENST00000588477 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 DDX49Q9Y6V7 483 aaKnown RBP18.23■□□□□ 0.51
IFT20-216ENST00000588477 ASB14A6NK59 587 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 TMEM232C9JQI7 657 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 ZEB2O60315 1214 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 TTLL1O95922 423 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 FDX1P10109 184 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 SMPD1P17405 629 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 PSMC6P62333 389 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
IFT20-216ENST00000588477 SLFN13Q68D06 897 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 GMCL1P1Q8NEA9 526 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 PDGFCQ9NRA1 345 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 RNF146Q9NTX7 359 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 PCDHA11Q9Y5I1 949 aa18.22■□□□□ 0.51
IFT20-216ENST00000588477 SKIV2LQ15477 1246 aaKnown RBP18.21■□□□□ 0.51
IFT20-216ENST00000588477 EEPD1Q7L9B9 569 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 OSBP2Q969R2 916 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 SEZ6LQ9BYH1 1024 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 ZBTB40Q9NUA8 1239 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 PTPRSQ13332 1948 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 ZNF536O15090 1300 aa18.21■□□□□ 0.51
IFT20-216ENST00000588477 RFXAPO00287 272 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 MS4A1P11836 297 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 ALAS1P13196 640 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 ATP2A2P16615 1042 aaKnown RBP18.2■□□□□ 0.5
IFT20-216ENST00000588477 TDO2P48775 406 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 KCNQ1P51787 676 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 STAT2P52630 851 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 IKQ13123 557 aaPredicted RBP18.2■□□□□ 0.5
IFT20-216ENST00000588477 AAK1Q2M2I8 961 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 TMEM63BQ5T3F8 832 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 IQSEC1Q6DN90 963 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 VWCEQ96DN2 955 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 TRERF1Q96PN7 1200 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 C1QTNF1Q9BXJ1 281 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
IFT20-216ENST00000588477 DDX19BQ9UMR2 479 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 SYNPO2Q9UMS6 1093 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
IFT20-216ENST00000588477 TET1Q8NFU7 2136 aa18.19■□□□□ 0.5
IFT20-216ENST00000588477 SMARCA5O60264 1052 aaPredicted RBP18.19■□□□□ 0.5
IFT20-216ENST00000588477 APPP05067 770 aa18.19■□□□□ 0.5
IFT20-216ENST00000588477 TAPT1Q6NXT6 567 aa18.19■□□□□ 0.5
IFT20-216ENST00000588477 FBXO16Q8IX29 292 aaPredicted RBP18.19■□□□□ 0.5
IFT20-216ENST00000588477 CHURC1Q8WUH1 139 aa18.19■□□□□ 0.5
IFT20-216ENST00000588477 LRRCC1Q9C099 1032 aa18.19■□□□□ 0.5
IFT20-216ENST00000588477 GPAA1O43292 621 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 TSPY3P0CV98 308 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 TSPY8P0CW00 308 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 TTLL4Q14679 1199 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 TKFCQ3LXA3 575 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 TMEM67Q5HYA8 995 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 DEFB128Q7Z7B8 93 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 FAM160B2Q86V87 743 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 KBTBD3Q8NAB2 608 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 STAG1Q8WVM7 1258 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 APPBP2Q92624 585 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 ALDH8A1Q9H2A2 487 aaPredicted RBP18.18■□□□□ 0.5
IFT20-216ENST00000588477 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 Q9Y3F1 56 aa18.18■□□□□ 0.5
IFT20-216ENST00000588477 SCN10AQ9Y5Y9 1956 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 ERC2O15083 957 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 CA3P07451 260 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 CYP2C9P11712 490 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 MCCP23508 829 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 SNAP25P60880 206 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 MUM1L1Q5H9M0 696 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 NEDD1Q8NHV4 660 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 ECHDC1Q9NTX5 307 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 TRMT13Q9NUP7 481 aaKnown RBP18.17■□□□□ 0.5
IFT20-216ENST00000588477 MTCH2Q9Y6C9 303 aa18.17■□□□□ 0.5
IFT20-216ENST00000588477 PATL2C9JE40 543 aaKnown RBP18.16■□□□□ 0.5
IFT20-216ENST00000588477 M0R2C6 588 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 RNF113AO15541 343 aaKnown RBP18.16■□□□□ 0.5
IFT20-216ENST00000588477 GTPBP6O43824 516 aaPredicted RBP18.16■□□□□ 0.5
IFT20-216ENST00000588477 GNAT2P19087 354 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 SLC1A4P43007 532 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 TFAP4Q01664 338 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
IFT20-216ENST00000588477 CYP39A1Q9NYL5 469 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 PLIN4Q96Q06 1357 aa18.16■□□□□ 0.5
IFT20-216ENST00000588477 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
IFT20-216ENST00000588477 PFKMP08237 780 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms