RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 GLIS2Q9BZE0 524 aaPredicted RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 DDX19AQ9NUU7 478 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHB8Q9UN66 801 aa11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 MRPL11Q9Y3B7 192 aaKnown RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
CHMP1B-202ENST00000588284 ZBED4O75132 1171 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 PPATQ06203 517 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 MTMR2Q13614 643 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 PRKG1Q13976 671 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 CCDC84Q86UT8 332 aaPredicted RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 ERO1BQ86YB8 467 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 SAMD3Q8N6K7 520 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 MRPS27Q92552 414 aaKnown RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 FERMT2Q96AC1 680 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 MS4A3Q96HJ5 214 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 SLF1Q9BQI6 1058 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 FTOQ9C0B1 505 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 BIN2Q9UBW5 565 aaPredicted RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 POLR2AP24928 1970 aaKnown RBP11.98□□□□□ -0.49
CHMP1B-202ENST00000588284 ABCB11O95342 1321 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 LAD1O00515 517 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 CXCL11O14625 94 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 PPP1R11O60927 126 aaPredicted RBP11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 PTPREP23469 700 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 MARCKSP29966 332 aaPredicted RBP11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 AP3B2Q13367 1082 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 ZNF174Q15697 407 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 ARL6IP4Q66PJ3 421 aaKnown RBP11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 NEK8Q86SG6 692 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 RRAGCQ9HB90 399 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 HOXC10Q9NYD6 342 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 FAM13BQ9NYF5 915 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 CTAGE5O15320 804 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 FLOT1O75955 427 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 ZNF445P59923 1031 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 FKBP1BP68106 108 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 FAM160A1Q05DH4 1040 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 VGLL4Q14135 290 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 COG2Q14746 738 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 AXDND1Q5T1B0 1012 aaPredicted RBP11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 JAKMIP3Q5VZ66 844 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 LDHDQ86WU2 507 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 FSIP1Q8NA03 581 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 TANGO6Q9C0B7 1094 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 TMEM63CQ9P1W3 806 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 PPP1R9AQ9ULJ8 1098 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 SNCAIPQ9Y6H5 919 aa11.96□□□□□ -0.49
CHMP1B-202ENST00000588284 MYH15Q9Y2K3 1946 aa11.96□□□□□ -0.5
CHMP1B-202ENST00000588284 MYPNQ86TC9 1320 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 FAM237AA0A1B0GTK4 181 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 FAM205CA6NFA0 338 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 PIK3CDO00329 1044 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 ICAM1P05362 532 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 LIG1P18858 919 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 VCAM1P19320 739 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 USP11P51784 963 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 ATP2C1P98194 919 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 PTGDRQ13258 359 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 INF2Q27J81 1249 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 MCF2L2Q86YR7 1114 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 RASGRP4Q8TDF6 673 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 SLC10A4Q96EP9 437 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 MAF1Q9H063 256 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 EHMT1Q9H9B1 1298 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 FBXO2Q9UK22 296 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-202ENST00000588284 SSC5DA1L4H1 1573 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms