RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 TOP1P11387 765 aaKnown RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 LIFRP42702 1097 aa17.37■□□□□ 0.37
HDAC5-207ENST00000588261 RCSD1Q6JBY9 416 aa17.37■□□□□ 0.37
HDAC5-207ENST00000588261 LRRC47Q8N1G4 583 aaKnown RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 ENAHQ8N8S7 591 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 TRIM43Q96BQ3 446 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 GUCD1Q96NT3 240 aa17.37■□□□□ 0.37
HDAC5-207ENST00000588261 COL25A1Q9BXS0 654 aaPredicted RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 PDLIM7Q9NR12 457 aa17.37■□□□□ 0.37
HDAC5-207ENST00000588261 DIS3Q9Y2L1 958 aaKnown RBP17.37■□□□□ 0.37
HDAC5-207ENST00000588261 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
HDAC5-207ENST00000588261 NMT2O60551 498 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 ADAMTS4O75173 837 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 CASTP20810 708 aaKnown RBP17.36■□□□□ 0.37
HDAC5-207ENST00000588261 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 C9orf50Q5SZB4 431 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 SNRNP48Q6IEG0 339 aaKnown RBP17.36■□□□□ 0.37
HDAC5-207ENST00000588261 RUFY3Q7L099 469 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 TEX13BQ9BXU2 312 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 PHF24Q9UPV7 400 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
HDAC5-207ENST00000588261 MYADML2A6NDP7 307 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 SH2B2O14492 632 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-207ENST00000588261 ATP2A1O14983 1001 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
HDAC5-207ENST00000588261 KCTD2Q14681 263 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 WTAPQ15007 396 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 TMEM67Q5HYA8 995 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 IFIT1BQ5T764 474 aaKnown RBP17.35■□□□□ 0.37
HDAC5-207ENST00000588261 SGMS1Q86VZ5 419 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 ZKSCAN3Q9BRR0 538 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 AGXT2Q9BYV1 514 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 SLC38A10Q9HBR0 1119 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
HDAC5-207ENST00000588261 XPNPEP3Q9NQH7 507 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
HDAC5-207ENST00000588261 SHHQ15465 462 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 C1orf53Q5VUE5 145 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 CCSAPQ6IQ19 270 aaPredicted RBP17.34■□□□□ 0.37
HDAC5-207ENST00000588261 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC5-207ENST00000588261 CPXCR1Q8N123 301 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 FAM161BQ96MY7 647 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
HDAC5-207ENST00000588261 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 LY9Q9HBG7 655 aa17.34■□□□□ 0.37
HDAC5-207ENST00000588261 ZNF536O15090 1300 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 RCAN1P53805 252 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 EPHB4P54760 987 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 TLE2Q04725 743 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 MAMDC4Q6UXC1 1216 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 PRPF38AQ8NAV1 312 aaKnown RBP17.33■□□□□ 0.36
HDAC5-207ENST00000588261 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 BADQ92934 168 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 KIFC2Q96AC6 838 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 KATNBL1Q9H079 304 aa17.33■□□□□ 0.36
HDAC5-207ENST00000588261 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.36
HDAC5-207ENST00000588261 CDH23Q9H251 3354 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 ASTN1O14525 1302 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 A0A1W2PQ45 241 aaPredicted RBP17.32■□□□□ 0.36
HDAC5-207ENST00000588261 A0A1W2PQY0 241 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 DDAH1O94760 285 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 SNHG28P0DPA3 235 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 RARBP10826 455 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 RABEP1Q15276 862 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 CHST3Q7LGC8 479 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 KLHDC9Q8NEP7 349 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 MAP3K14Q99558 947 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 KIF2CQ99661 725 aa17.32■□□□□ 0.36
HDAC5-207ENST00000588261 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
HDAC5-207ENST00000588261 SYNGAP1Q96PV0 1343 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 CTAGE5O15320 804 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 AKR1A1P14550 325 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 PTGS1P23219 599 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 COPB2P35606 906 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 SLC4A3P48751 1232 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 EVCP57679 992 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 SMAD3P84022 425 aaKnown RBP17.31■□□□□ 0.36
HDAC5-207ENST00000588261 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
HDAC5-207ENST00000588261 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
HDAC5-207ENST00000588261 SEMA6BQ9H3T3 888 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 MCM3APO60318 1980 aa17.31■□□□□ 0.36
HDAC5-207ENST00000588261 CCDC69A6NI79 296 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 PLA2G6O60733 806 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 CALM1P0DP23 149 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 CALM2P0DP24 149 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 CALM3P0DP25 149 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 PDHBP11177 359 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 SNAP25P60880 206 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 FGD1P98174 961 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
HDAC5-207ENST00000588261 GPATCH4Q5T3I0 446 aaKnown RBP17.3■□□□□ 0.36
HDAC5-207ENST00000588261 Q6ZUG5 572 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms