RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
GCDH-206ENST00000587832 CCDC174Q6PII3 467 aa20.27■□□□□ 0.84
GCDH-206ENST00000587832 SMC5Q8IY18 1101 aa20.27■□□□□ 0.84
GCDH-206ENST00000587832 CCPG1Q9ULG6 757 aa20.27■□□□□ 0.84
GCDH-206ENST00000587832 GNEQ9Y223 722 aaKnown RBP20.27■□□□□ 0.84
GCDH-206ENST00000587832 TMEM265A0A087WTH1 108 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 LOC102724159A0A0B4J2E5 919 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 ARVCFO00192 962 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 DLL1O00548 723 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 IRX5P78411 483 aaPredicted RBP20.26■□□□□ 0.83
GCDH-206ENST00000587832 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
GCDH-206ENST00000587832 PWP2Q15269 919 aaKnown RBP20.26■□□□□ 0.83
GCDH-206ENST00000587832 ZNF589Q86UQ0 364 aaPredicted RBP20.26■□□□□ 0.83
GCDH-206ENST00000587832 MORC4Q8TE76 937 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 RNPC3Q96LT9 517 aaKnown RBP20.26■□□□□ 0.83
GCDH-206ENST00000587832 TMEM47Q9BQJ4 181 aa20.26■□□□□ 0.83
GCDH-206ENST00000587832 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.25■□□□□ 0.83
GCDH-206ENST00000587832 NT5C2P49902 561 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 TLK2Q86UE8 772 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 FAM126BQ8IXS8 530 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 TTC14Q96N46 770 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 SEMA6BQ9H3T3 888 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 PNMA2Q9UL42 364 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 Q9Y3F1 56 aa20.25■□□□□ 0.83
GCDH-206ENST00000587832 CUL9Q8IWT3 2517 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 CABYRO75952 493 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 MFAP1P55081 439 aaKnown RBP20.24■□□□□ 0.83
GCDH-206ENST00000587832 SNAP25P60880 206 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 SYDE2Q5VT97 1194 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 MFSD5Q6N075 450 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 SLC43A3Q8NBI5 491 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 FAM161BQ96MY7 647 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 SEZ6LQ9BYH1 1024 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 OSBPL3Q9H4L5 887 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 VTA1Q9NP79 307 aa20.24■□□□□ 0.83
GCDH-206ENST00000587832 TRIM6-TRIM34B2RNG4 842 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 TLR3O15455 904 aaKnown RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 PDHBP11177 359 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 FSCN1Q16658 493 aaKnown RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 RRP12Q5JTH9 1297 aaKnown RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 IQSEC1Q6DN90 963 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 TTBK2Q6IQ55 1244 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 TAPT1Q6NXT6 567 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 NSMFQ6X4W1 530 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 CDX2Q99626 313 aaPredicted RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 TTYH1Q9H313 450 aaPredicted RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
GCDH-206ENST00000587832 MYH6P13533 1939 aa20.23■□□□□ 0.83
GCDH-206ENST00000587832 CD4P01730 458 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 SNHG28P0DPA3 235 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 SMPD1P17405 629 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 SLC16A2P36021 539 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 PPIGQ13427 754 aaKnown RBP eCLIP20.22■□□□□ 0.837e-7■■■□□ 16.1
GCDH-206ENST00000587832 MFSD6Q6ZSS7 791 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 VTI1AQ96AJ9 217 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 AP5M1Q9H0R1 490 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 RNF41Q9H4P4 317 aaPredicted RBP20.22■□□□□ 0.83
GCDH-206ENST00000587832 ADD3Q9UEY8 706 aaKnown RBP20.22■□□□□ 0.83
GCDH-206ENST00000587832 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
GCDH-206ENST00000587832 SDSP20132 328 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 HAND2P61296 217 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 BEX3Q00994 111 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 ZNF543Q08ER8 600 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
GCDH-206ENST00000587832 CHD1LQ86WJ1 897 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 TBC1D10CQ8IV04 446 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 FBXO16Q8IX29 292 aaPredicted RBP20.21■□□□□ 0.83
GCDH-206ENST00000587832 RILPL2Q969X0 211 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 FRMPD2Q68DX3 1309 aaPredicted RBP20.21■□□□□ 0.83
GCDH-206ENST00000587832 WDR19Q8NEZ3 1342 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 UNC80Q8N2C7 3258 aa20.21■□□□□ 0.83
GCDH-206ENST00000587832 GBF1Q92538 1859 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.2■□□□□ 0.82
GCDH-206ENST00000587832 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.2■□□□□ 0.82
GCDH-206ENST00000587832 NFIBO00712 420 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 ZEB2O60315 1214 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 ALDH5A1P51649 535 aaPredicted RBP20.2■□□□□ 0.82
GCDH-206ENST00000587832 NUCB1Q02818 461 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 CXCL17Q6UXB2 119 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 TMEM199Q8N511 208 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.2■□□□□ 0.829e-7■□□□□ 10.7
GCDH-206ENST00000587832 PDGFCQ9NRA1 345 aa20.2■□□□□ 0.82
GCDH-206ENST00000587832 A0A0C4DFX4 3053 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 BAATQ14032 418 aaPredicted RBP20.19■□□□□ 0.82
GCDH-206ENST00000587832 DUSP28Q4G0W2 176 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 GPATCH4Q5T3I0 446 aaKnown RBP20.19■□□□□ 0.82
GCDH-206ENST00000587832 RASIP1Q5U651 963 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 DGKHQ86XP1 1220 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.19■□□□□ 0.82
GCDH-206ENST00000587832 CLEC4DQ8WXI8 215 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 ESR2Q92731 530 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 DDX49Q9Y6V7 483 aaKnown RBP20.19■□□□□ 0.82
GCDH-206ENST00000587832 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
GCDH-206ENST00000587832 NEDD4P46934 1319 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms