RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 UPF3AQ9H1J1 476 aaKnown RBP22.14■■□□□ 1.13
TRIM47-205ENST00000587774 PRUNE2Q8WUY3 3088 aa22.14■■□□□ 1.13
TRIM47-205ENST00000587774 ICAM1P05362 532 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 PCP11498 1178 aaKnown RBP22.13■■□□□ 1.13
TRIM47-205ENST00000587774 ITGB8P26012 769 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 MFAP1P55081 439 aaKnown RBP22.13■■□□□ 1.13
TRIM47-205ENST00000587774 BTNL9Q6UXG8 535 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 MFSD6Q6ZSS7 791 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 NUP133Q8WUM0 1156 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 CYP39A1Q9NYL5 469 aa22.13■■□□□ 1.13
TRIM47-205ENST00000587774 DDX49Q9Y6V7 483 aaKnown RBP22.13■■□□□ 1.13
TRIM47-205ENST00000587774 PDHBP11177 359 aa22.12■■□□□ 1.13
TRIM47-205ENST00000587774 SHHQ15465 462 aa22.12■■□□□ 1.13
TRIM47-205ENST00000587774 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
TRIM47-205ENST00000587774 SYDE2Q5VT97 1194 aa22.12■■□□□ 1.13
TRIM47-205ENST00000587774 CWC27Q6UX04 472 aaKnown RBP22.12■■□□□ 1.13
TRIM47-205ENST00000587774 GPCPD1Q9NPB8 672 aa22.12■■□□□ 1.13
TRIM47-205ENST00000587774 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.11■■□□□ 1.13
TRIM47-205ENST00000587774 ASGR1P07306 291 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 GJA9P57773 515 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 NSMFQ6X4W1 530 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 ANKRD33Q7Z3H0 272 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 SPC25Q9HBM1 224 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 DIAPH3Q9NSV4 1193 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 MTMR10Q9NXD2 777 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 TANC1Q9C0D5 1861 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 SCN5AQ14524 2016 aa22.11■■□□□ 1.13
TRIM47-205ENST00000587774 SCN10AQ9Y5Y9 1956 aa22.1■■□□□ 1.13
TRIM47-205ENST00000587774 ASB14A6NK59 587 aa22.1■■□□□ 1.13
TRIM47-205ENST00000587774 KIAA0355O15063 1070 aa22.1■■□□□ 1.13
TRIM47-205ENST00000587774 CTAGE5O15320 804 aa22.1■■□□□ 1.13
TRIM47-205ENST00000587774 PCSK9Q8NBP7 692 aaKnown RBP22.1■■□□□ 1.13
TRIM47-205ENST00000587774 GLT1D1Q96MS3 346 aa22.1■■□□□ 1.13
TRIM47-205ENST00000587774 PURBQ96QR8 312 aaKnown RBP22.1■■□□□ 1.13
TRIM47-205ENST00000587774 RNF41Q9H4P4 317 aaPredicted RBP22.1■■□□□ 1.13
TRIM47-205ENST00000587774 BAZ2BQ9UIF8 2168 aaKnown RBP22.1■■□□□ 1.13
TRIM47-205ENST00000587774 TNFAIP2Q03169 654 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 ZNF543Q08ER8 600 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 FAAP100Q0VG06 881 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 GNASQ5JWF2 1037 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 ESR2Q92731 530 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 TTC14Q96N46 770 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 ZKSCAN3Q9BRR0 538 aa22.09■■□□□ 1.13
TRIM47-205ENST00000587774 ELP1O95163 1332 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 NFIBO00712 420 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 ZNF213O14771 459 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 SNHG28P0DPA3 235 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 RAG1P15918 1043 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 PTGS1P23219 599 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 TLK2Q86UE8 772 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 FBXO16Q8IX29 292 aaPredicted RBP22.08■■□□□ 1.13
TRIM47-205ENST00000587774 TOX2Q96NM4 488 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 TMEM39AQ9NV64 488 aa22.08■■□□□ 1.13
TRIM47-205ENST00000587774 TRIP12Q14669 1992 aaPredicted RBP22.08■■□□□ 1.12
TRIM47-205ENST00000587774 MYO9BQ13459 2157 aa22.08■■□□□ 1.12
TRIM47-205ENST00000587774 MROH7Q68CQ1 1323 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 DCDC2CA8MYV0 355 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 HIP1O00291 1037 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 NKX3-2P78367 333 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 BEX3Q00994 111 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 EEPD1Q7L9B9 569 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 PDGFCQ9NRA1 345 aa22.07■■□□□ 1.12
TRIM47-205ENST00000587774 GNEQ9Y223 722 aaKnown RBP22.07■■□□□ 1.12
TRIM47-205ENST00000587774 EPHB4P54760 987 aa22.06■■□□□ 1.12
TRIM47-205ENST00000587774 BAATQ14032 418 aaPredicted RBP22.06■■□□□ 1.12
TRIM47-205ENST00000587774 SLC30A10Q6XR72 485 aa22.06■■□□□ 1.12
TRIM47-205ENST00000587774 NOL8Q76FK4 1167 aaKnown RBP22.06■■□□□ 1.12
TRIM47-205ENST00000587774 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
TRIM47-205ENST00000587774 STXBP5LQ9Y2K9 1186 aa22.06■■□□□ 1.12
TRIM47-205ENST00000587774 A0A0U1RQG5 324 aaPredicted RBP22.05■■□□□ 1.12
TRIM47-205ENST00000587774 KDM4AO75164 1064 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 SMPD1P17405 629 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 CDK7P50613 346 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 ALDH5A1P51649 535 aaPredicted RBP22.05■■□□□ 1.12
TRIM47-205ENST00000587774 FAM109BQ6ICB4 259 aaPredicted RBP22.05■■□□□ 1.12
TRIM47-205ENST00000587774 TAPT1Q6NXT6 567 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 MORC4Q8TE76 937 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 VTI1AQ96AJ9 217 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 DSCC1Q9BVC3 393 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 IL25Q9H293 177 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
TRIM47-205ENST00000587774 CHD9Q3L8U1 2897 aa22.05■■□□□ 1.12
TRIM47-205ENST00000587774 PTPDC1A2A3K4 754 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 B4E1Z4 1266 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 PDE4AP27815 886 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 FPGSQ05932 587 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 TMEM63BQ5T3F8 832 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 IQCA1Q86XH1 822 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 CLEC4DQ8WXI8 215 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 FAM161BQ96MY7 647 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 CPVLQ9H3G5 476 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 VTA1Q9NP79 307 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 ADD3Q9UEY8 706 aaKnown RBP22.04■■□□□ 1.12
TRIM47-205ENST00000587774 DOCK5Q9H7D0 1870 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 WDR19Q8NEZ3 1342 aa22.04■■□□□ 1.12
TRIM47-205ENST00000587774 CUL9Q8IWT3 2517 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 ARVCFO00192 962 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 NT5C2P49902 561 aa22.03■■□□□ 1.12
TRIM47-205ENST00000587774 FSCN1Q16658 493 aaKnown RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms