RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 ATG4CQ96DT6 458 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 CAPNS2Q96L46 248 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 MROH8Q9H579 483 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 EHMT1Q9H9B1 1298 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 RIC8AQ9NPQ8 531 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 PCDHA4Q9UN74 947 aa11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-207ENST00000587537 THSD7BQ9C0I4 1608 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 VPS37CA5D8V6 355 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 SMCO2A6NFE2 343 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 U2AF2P26368 475 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 STAT3P40763 770 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 FAM110CQ1W6H9 321 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 BLIDQ8IZY5 108 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 REXO1Q8N1G1 1221 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 P2RX7Q99572 595 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 PSTPIP2Q9H939 334 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 ZFYVE28Q9HCC9 887 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 VPS54Q9P1Q0 977 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 MORF4L1Q9UBU8 362 aa11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 ZNF214Q9UL59 606 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-207ENST00000587537 PFASO15067 1338 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 ZNF536O15090 1300 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 LOC102724159A0A0B4J2E5 919 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 TRAPPC10P48553 1259 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 DGKZQ13574 1117 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 TMEM132BQ14DG7 1078 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 PWP2Q15269 919 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 SNRNP48Q6IEG0 339 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 CYP4F22Q6NT55 531 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 CCDC174Q6PII3 467 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 KRT25Q7Z3Z0 450 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 GPRC5AQ8NFJ5 357 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 GPKOWQ92917 476 aaPredicted RBP eCLIP11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 SPATC1LQ9H0A9 340 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 ACAD9Q9H845 621 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 MTMR6Q9Y217 621 aa11.86□□□□□ -0.51
CLPTM1-207ENST00000587537 hCG_1642624A0A1W2PR95 340 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 B4DLN1 442 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 CA12O43570 354 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 STRNO43815 780 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 TLR2O60603 784 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 F13A1P00488 732 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 HSPA6P17066 643 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 ERVK-24P63145 666 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 KIF23Q02241 960 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 TAF1CQ15572 869 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 USH1GQ495M9 461 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 MCTP1Q6DN14 999 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 PIBF1Q8WXW3 757 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 TRERF1Q96PN7 1200 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 MPHOSPH6Q99547 160 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 PTPN18Q99952 460 aa11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 RAVER2Q9HCJ3 691 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 NOL7Q9UMY1 257 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-207ENST00000587537 CCDC194A0A1B0GVG4 234 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 SPDYE3A6NKU9 549 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 BMP15O95972 392 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 ALAS1P13196 640 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 MAPK4P31152 587 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 HSD17B4P51659 736 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 C1QTNF8P60827 252 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 PLS1Q14651 629 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 RILPL1Q5EBL4 403 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 CCAR1Q8IX12 1150 aaKnown RBP11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 CPXCR1Q8N123 301 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 COA7Q96BR5 231 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 AGBL1Q96MI9 1066 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 ZNF396Q96N95 335 aaPredicted RBP11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 AIFM3Q96NN9 605 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 ADGRA2Q96PE1 1338 aa11.84□□□□□ -0.51
CLPTM1-207ENST00000587537 M0R2N6 131 aa11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 IGF2BP3O00425 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 CLK2P49760 499 aaKnown RBP11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 NONOQ15233 471 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 NPY5RQ15761 445 aa11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
CLPTM1-207ENST00000587537 NOM1Q5C9Z4 860 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms