RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CYP2R1Q6VVX0 501 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 SHDQ96IW2 340 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 IMPACTQ9P2X3 320 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 RAPGEFL1Q9UHV5 662 aa6.97□□□□□ -1.29
VMP1-205ENST00000587470 MBD1Q9UIS9 605 aaPredicted RBP6.97□□□□□ -1.29
VMP1-205ENST00000587470 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
VMP1-205ENST00000587470 A0A1W2PQ27 194 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 A0A1W2PQ64 194 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 A0A1W2PQC6 194 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 A0A1W2PQD8 194 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 PPP2R5EQ16537 467 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 GBP3Q9H0R5 595 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 IRF2BPLQ9H1B7 796 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 ACBD3Q9H3P7 528 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 KLHL14Q9P2G3 628 aa6.96□□□□□ -1.3
VMP1-205ENST00000587470 TBC1D8O95759 1140 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 CD3EP07766 207 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 CASP7P55210 303 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 PPP2R5DQ14738 602 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 ZNF385BQ569K4 471 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 ADAT2Q7Z6V5 191 aaKnown RBP6.95□□□□□ -1.3
VMP1-205ENST00000587470 ZDHHC15Q96MV8 337 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 KLHL25Q9H0H3 589 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 TNFRSF12AQ9NP84 129 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 PCDHB10Q9UN67 800 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 INPP5FQ9Y2H2 1132 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 KCTD3Q9Y597 815 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 NCANO14594 1321 aa6.95□□□□□ -1.3
VMP1-205ENST00000587470 N4BP3O15049 544 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 PPM1BO75688 479 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 MVKQ03426 396 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 RAB3GAP1Q15042 981 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 ADCY4Q8NFM4 1077 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 SIGLEC10Q96LC7 697 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 PTCHD1Q96NR3 888 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 CCSER2Q9H7U1 834 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 STRIP2Q9ULQ0 834 aa6.94□□□□□ -1.3
VMP1-205ENST00000587470 NUDT19A8MXV4 375 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 RFXAPO00287 272 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 EPHX1P07099 455 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 IFNGR1P15260 489 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 CBX2Q14781 532 aaPredicted RBP6.93□□□□□ -1.3
VMP1-205ENST00000587470 NR1I3Q14994 352 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 NLGN2Q8NFZ4 835 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 KLHL6Q8WZ60 621 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 FGD4Q96M96 766 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 IRAK3Q9Y616 596 aa6.93□□□□□ -1.3
VMP1-205ENST00000587470 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
VMP1-205ENST00000587470 PRRG2O14669 202 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 CORO7P57737 925 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 SSPNQ14714 243 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 RCSD1Q6JBY9 416 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 TMEM151BQ8IW70 566 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 ARHGEF39Q8N4T4 335 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 RCC1LQ96I51 464 aaKnown RBP6.92□□□□□ -1.3
VMP1-205ENST00000587470 PDLIM7Q9NR12 457 aa6.92□□□□□ -1.3
VMP1-205ENST00000587470 A0A1W2PQJ5 194 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 AURKAO14965 403 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 L1CAMP32004 1257 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 EPHB3P54753 998 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 TCERG1LQ5VWI1 586 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 VHLLQ6RSH7 139 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 RPTNQ6XPR3 784 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 TMC6Q7Z403 805 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 LDHDQ86WU2 507 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 MZB1Q8WU39 189 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 C20orf173Q96LM9 149 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 NCAPD3P42695 1498 aa6.91□□□□□ -1.3
VMP1-205ENST00000587470 NESP48681 1621 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 ANKRD34BA5PLL1 514 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 VAMP4O75379 141 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 INHBBP09529 407 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 ATF4P18848 351 aaPredicted RBP6.9□□□□□ -1.3
VMP1-205ENST00000587470 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 CDR1P51861 262 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 AMPD2Q01433 879 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 GRB10Q13322 594 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 BICRALQ6AI39 1079 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 PAQR3Q6TCH7 311 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 FAM169BQ8N8A8 192 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 MCMBPQ9BTE3 642 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 CGGBP1Q9UFW8 167 aaPredicted RBP6.9□□□□□ -1.3
VMP1-205ENST00000587470 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
VMP1-205ENST00000587470 IRS4O14654 1257 aaPredicted RBP6.89□□□□□ -1.31
VMP1-205ENST00000587470 SRGAP3O43295 1099 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 CYBBP04839 570 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 DBHP09172 617 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 PI3P19957 117 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 SEPHS1P49903 392 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 DPY19L1Q2PZI1 675 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 ZC3H14Q6PJT7 736 aaKnown RBP6.89□□□□□ -1.31
VMP1-205ENST00000587470 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 ANAPC16Q96DE5 110 aa6.89□□□□□ -1.31
VMP1-205ENST00000587470 CCDC9Q9Y3X0 531 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms