RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM160B2Q86V87 743 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 KIFC2Q96AC6 838 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 KIAA1683Q9H0B3 1180 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 DNAJC25Q9H1X3 360 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 HOOK1Q9UJC3 728 aaKnown RBP22.55■■□□□ 1.2
TRIM47-204ENST00000587339 FEM1BQ9UK73 627 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 NEMFO60524 1076 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 PRPHP41219 470 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 TRAF1Q13077 416 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 DPY19L2Q6NUT2 758 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 ELOA2Q8IYF1 753 aaPredicted RBP22.54■■□□□ 1.2
TRIM47-204ENST00000587339 SCYL3Q8IZE3 742 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 LPAR1Q92633 364 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 ANO10Q9NW15 660 aa22.54■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L15C9J2P7 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L13C9JLJ4 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L11C9JVI0 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L18D6R9N7 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L22D6RA61 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L17D6RBQ6 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L19D6RCP7 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L20D6RJB6 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L24Q0WX57 530 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 SUPT20HL1Q3ZLR7 823 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 USP17L6PQ6QN14 398 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 ZNF165P49910 485 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 ZKSCAN4Q969J2 545 aaPredicted RBP22.53■■□□□ 1.2
TRIM47-204ENST00000587339 SERTAD1Q9UHV2 236 aa22.53■■□□□ 1.2
TRIM47-204ENST00000587339 WDR46O15213 610 aaKnown RBP22.52■■□□□ 1.2
TRIM47-204ENST00000587339 OR52Z1P0C646 297 aa22.52■■□□□ 1.2
TRIM47-204ENST00000587339 KANK3Q6NY19 840 aa22.52■■□□□ 1.2
TRIM47-204ENST00000587339 RANBP17Q9H2T7 1088 aaKnown RBP22.52■■□□□ 1.2
TRIM47-204ENST00000587339 PICK1Q9NRD5 415 aa22.52■■□□□ 1.2
TRIM47-204ENST00000587339 FZD1Q9UP38 647 aa22.52■■□□□ 1.2
TRIM47-204ENST00000587339 CCDC173Q0VFZ6 552 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 PNOCQ13519 176 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 DHX58Q96C10 678 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 CCDC34Q96HJ3 373 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 FBXO28Q9NVF7 368 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 A0A087X0B3 334 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 MEIS2O14770 477 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 ACTN4O43707 911 aaKnown RBP22.51■■□□□ 1.19
TRIM47-204ENST00000587339 AP3B2Q13367 1082 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 MTMR2Q13614 643 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 GPR162Q16538 588 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 MCTP2Q6DN12 878 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 SAMD1Q6SPF0 538 aaPredicted RBP22.51■■□□□ 1.19
TRIM47-204ENST00000587339 DCPSQ96C86 337 aaKnown RBP22.51■■□□□ 1.19
TRIM47-204ENST00000587339 KLRG1Q96E93 195 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 AS3MTQ9HBK9 375 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 CBX8Q9HC52 389 aa22.51■■□□□ 1.19
TRIM47-204ENST00000587339 A0A087WWV3 80 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 TXLNAP40222 546 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 USP14P54578 494 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 CCDC174Q6PII3 467 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 LUZP1Q86V48 1076 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 PYM1Q9BRP8 204 aaKnown RBP22.5■■□□□ 1.19
TRIM47-204ENST00000587339 TUBE1Q9UJT0 475 aa22.5■■□□□ 1.19
TRIM47-204ENST00000587339 MDM2Q00987 491 aaPredicted RBP22.49■■□□□ 1.19
TRIM47-204ENST00000587339 SPP2Q13103 211 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 POSTNQ15063 836 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 PPP4R3AQ6IN85 833 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 C11orf57Q6ZUT1 292 aaPredicted RBP22.49■■□□□ 1.19
TRIM47-204ENST00000587339 POTEDQ86YR6 584 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 SULF1Q8IWU6 871 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 WDR18Q9BV38 432 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 DOCK1Q14185 1865 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 SSC5DA1L4H1 1573 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 BIN1O00499 593 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 FOXN1O15353 648 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 EDIL3O43854 480 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 TDP2O95551 362 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 SLFN14P0C7P3 912 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 PTPRAP18433 802 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 CEP57L1Q8IYX8 460 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 ANO3Q9BYT9 981 aa22.49■■□□□ 1.19
TRIM47-204ENST00000587339 TAL1P17542 331 aaPredicted RBP22.48■■□□□ 1.19
TRIM47-204ENST00000587339 CDC25AP30304 524 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 CALCRLQ16602 461 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 IQUBQ8NA54 791 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 PRPF38AQ8NAV1 312 aaKnown RBP22.48■■□□□ 1.19
TRIM47-204ENST00000587339 ZNF280CQ8ND82 737 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 PPP1R9BQ96SB3 815 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 NAT10Q9H0A0 1025 aaKnown RBP22.48■■□□□ 1.19
TRIM47-204ENST00000587339 USP25Q9UHP3 1055 aa22.48■■□□□ 1.19
TRIM47-204ENST00000587339 OPLAHO14841 1288 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 SLC37A4O43826 429 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 GCFC2P16383 781 aaKnown RBP22.47■■□□□ 1.19
TRIM47-204ENST00000587339 BACE1P56817 501 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 DGKZQ13574 1117 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 L3MBTL3Q96JM7 780 aaPredicted RBP22.47■■□□□ 1.19
TRIM47-204ENST00000587339 AK8Q96MA6 479 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 NAP1L4Q99733 375 aaKnown RBP22.47■■□□□ 1.19
TRIM47-204ENST00000587339 SLF1Q9BQI6 1058 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 PCDHA5Q9Y5H7 936 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 SPDYE3A6NKU9 549 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 FOSP01100 380 aaPredicted RBP22.47■■□□□ 1.19
TRIM47-204ENST00000587339 VCAM1P19320 739 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 NLRP12P59046 1061 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 DPCR1Q3MIW9 517 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms