RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 DYNC1LI2O43237 492 aaPredicted RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 ZEB2O60315 1214 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 PFKMP08237 780 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 ADD2P35612 726 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 CEP85Q6P2H3 762 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 CTR9Q6PD62 1173 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDF2-204ENST00000587338 ALYREFQ86V81 257 aaKnown RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 STK11IPQ8N1F8 1099 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 CHST13Q8NET6 341 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 VWCEQ96DN2 955 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
SDF2-204ENST00000587338 SLC38A10Q9HBR0 1119 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 C11orf16Q9NQ32 467 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 ISY1Q9ULR0 285 aaKnown RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 SLC4A4Q9Y6R1 1079 aa10.24□□□□□ -0.77
SDF2-204ENST00000587338 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
SDF2-204ENST00000587338 GPR37L1O60883 481 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 ARHGEF15O94989 841 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 CHGBP05060 677 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 CYP2C9P11712 490 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 SMPD1P17405 629 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 EEPD1Q7L9B9 569 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 CLASRPQ8N2M8 674 aaKnown RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 SEZ6LQ9BYH1 1024 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.23□□□□□ -0.77
SDF2-204ENST00000587338 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 MKNK2Q9HBH9 465 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 A1CFQ9NQ94 594 aaKnown RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 TRMT13Q9NUP7 481 aaKnown RBP10.23□□□□□ -0.77
SDF2-204ENST00000587338 PAG1Q9NWQ8 432 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 NYAP2Q9P242 653 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 CLIP2Q9UDT6 1046 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 FEM1BQ9UK73 627 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
SDF2-204ENST00000587338 ASB14A6NK59 587 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 ACTN1P12814 892 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 RASA1P20936 1047 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 OAZ1P54368 228 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 RRP1P56182 461 aaKnown RBP10.22□□□□□ -0.77
SDF2-204ENST00000587338 TAP1Q03518 808 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 GRB10Q13322 594 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 HSP90AB4PQ58FF6 505 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 POTEHQ6S545 545 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 FAM133AQ8N9E0 248 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
SDF2-204ENST00000587338 SLC9A7Q96T83 725 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 BOLA2Q9H3K6 86 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 PDGFCQ9NRA1 345 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 RNF146Q9NTX7 359 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 ARPP21Q9UBL0 812 aaPredicted RBP10.22□□□□□ -0.77
SDF2-204ENST00000587338 TNKSO95271 1327 aa10.22□□□□□ -0.77
SDF2-204ENST00000587338 GREB1LQ9C091 1923 aaPredicted RBP10.21□□□□□ -0.77
SDF2-204ENST00000587338 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 KIF28PB7ZC32 967 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 SUPT20HL2P0C7V6 817 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 RLBP1P12271 317 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 IKQ13123 557 aaPredicted RBP10.21□□□□□ -0.77
SDF2-204ENST00000587338 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 SPRED2Q7Z698 418 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 HERC6Q8IVU3 1022 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 LRRC47Q8N1G4 583 aaKnown RBP10.21□□□□□ -0.77
SDF2-204ENST00000587338 GDPD5Q8WTR4 605 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 UIMC1Q96RL1 719 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.77
SDF2-204ENST00000587338 CD320Q9NPF0 282 aa10.21□□□□□ -0.77
SDF2-204ENST00000587338 TRIOO75962 3097 aa10.21□□□□□ -0.78
SDF2-204ENST00000587338 MINDY4BA8MYZ0 360 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 PI4K2BG5E9Z4 385 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 SCN5AQ14524 2016 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 UBE3CQ15386 1083 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 FAM47CQ5HY64 1035 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 IQSEC1Q6DN90 963 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 PHOSPHO2Q8TCD6 241 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 CHMP4CQ96CF2 233 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 KIF1BPQ96EK5 621 aa10.2□□□□□ -0.78
SDF2-204ENST00000587338 PUS7LQ9H0K6 701 aaKnown RBP10.2□□□□□ -0.78
SDF2-204ENST00000587338 COL4A4P53420 1690 aaPredicted RBP10.19□□□□□ -0.78
SDF2-204ENST00000587338 IGKV6D-41A0A0C4DH26 115 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 PRR33A8MZF0 331 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 TMEM232C9JQI7 657 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 LPXNO60711 386 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 PRDM1O75626 825 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 MYL3P08590 195 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 BMP3P12645 472 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 ALAS1P13196 640 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 SSTR3P32745 418 aaPredicted RBP10.19□□□□□ -0.78
SDF2-204ENST00000587338 RFC2P35250 354 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 KCNJ6P48051 423 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 STAT2P52630 851 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 SLFN13Q68D06 897 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 TAPT1Q6NXT6 567 aa10.19□□□□□ -0.78
SDF2-204ENST00000587338 KIAA1211Q6ZU35 1233 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms