RNA–Protein interactions for RNA: ENST00000587246.1

NEDD4L-217, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-217ENST00000587246 GPR55Q9Y2T6 319 aaPredicted RBP4.84□□□□□ -1.63
NEDD4L-217ENST00000587246 IQCA1LA6NCM1 817 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 OR14I1A6ND48 311 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 SUSD5O60279 629 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 PSPNO60542 156 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 YBX3P16989 372 aaKnown RBP eCLIP4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 TRHRP34981 398 aaPredicted RBP4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 SEPHS1P49903 392 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 ERVFRD-1P60508 538 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 PPP2R5DQ14738 602 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 MLANAQ16655 118 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 DDR2Q16832 855 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 TIGD5Q53EQ6 642 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 IQCEQ6IPM2 695 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 LRP10Q7Z4F1 713 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 TRIM59Q8IWR1 403 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 ADCY4Q8NFM4 1077 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 SGSM3Q96HU1 749 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 MRGPRX3Q96LB0 322 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 TANGO6Q9C0B7 1094 aa4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 ZNF552Q9H707 407 aaPredicted RBP4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 DCP1AQ9NPI6 582 aaPredicted RBP4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.83□□□□□ -1.64
NEDD4L-217ENST00000587246 A0A1W2PQ27 194 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 A0A1W2PQ64 194 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 A0A1W2PQC6 194 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 A0A1W2PQD8 194 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 C2orf71A6NGG8 1288 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 U2SURPO15042 1029 aaKnown RBP4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 SEMA7AO75326 666 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 CPP00450 1065 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 MPOP05164 745 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 PAMP19021 973 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 HOXC12P31275 282 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 L1CAMP32004 1257 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 CYP4F8P98187 520 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 TAF7LQ5H9L4 462 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 TMEM52Q8NDY8 209 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 COPS5Q92905 334 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 TRIM55Q9BYV6 548 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 NKX2-4Q9H2Z4 354 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 NSUN3Q9H649 340 aaKnown RBP4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 APEX2Q9UBZ4 518 aa4.82□□□□□ -1.64
NEDD4L-217ENST00000587246 SRGAP3O43295 1099 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 GJB6O95452 261 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 TSPAN15O95858 294 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 SCG5P05408 212 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 IFNGR1P15260 489 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 PRKCAP17252 672 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 GLDCP23378 1020 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 PDE6BP35913 854 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 CEBPAP49715 358 aaPredicted RBP4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 YBX1P67809 324 aaKnown RBP4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 NR1I3Q14994 352 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 TESK1Q15569 626 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 SV2CQ496J9 727 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 E4F1Q66K89 784 aaPredicted RBP4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 GTF2IRD2BQ6EKJ0 949 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 ZPBP2Q6X784 338 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 PRR23BQ6ZRT6 265 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 GTF2IRD2Q86UP8 949 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 FAM177A1Q8N128 213 aaPredicted RBP4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 JMJD8Q96S16 334 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 MMP19Q99542 508 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 PDLIM7Q9NR12 457 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 SIRPGQ9P1W8 387 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 LRP2BPQ9P2M1 347 aa4.81□□□□□ -1.64
NEDD4L-217ENST00000587246 NPHP3-ACAD11A0A0J9YXS1 232 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 TEX51A0A1B0GUA7 166 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 STXBP3O00186 592 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 KCNH1O95259 989 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 MED14OSP0DP75 135 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 RBL2Q08999 1139 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 ZNF227Q86WZ6 799 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 NUP43Q8NFH3 380 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 HNRNPLLQ8WVV9 542 aaKnown RBP4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 TNFRSF12AQ9NP84 129 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 IMPACTQ9P2X3 320 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 MSRB2Q9Y3D2 182 aa4.8□□□□□ -1.64
NEDD4L-217ENST00000587246 A0A1W2PQJ5 194 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 NPHS1O60500 1241 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 VAMP4O75379 141 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 CAPNS1P04632 268 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 CYBBP04839 570 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 ITGAVP06756 1048 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 C8AP07357 584 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 TMEM253P0C7T8 217 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 SLC10A6Q3KNW5 377 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 ADGRF1Q5T601 910 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 ACBD5Q5T8D3 534 aaPredicted RBP4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 MRM1Q6IN84 353 aaKnown RBP4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 CABP7Q86V35 215 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 LRRC47Q8N1G4 583 aaKnown RBP4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 MICAL1Q8TDZ2 1067 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 PPP1R14AQ96A00 147 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 DIRC2Q96SL1 478 aa4.79□□□□□ -1.64
NEDD4L-217ENST00000587246 PLCD4Q9BRC7 762 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms