RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
VAT1-205ENST00000587173 CCPG1Q9ULG6 757 aa18.55■□□□□ 0.56
VAT1-205ENST00000587173 DDX49Q9Y6V7 483 aaKnown RBP18.55■□□□□ 0.56
VAT1-205ENST00000587173 ASTN1O14525 1302 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 TMEM265A0A087WTH1 108 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 TLR3O15455 904 aaKnown RBP18.54■□□□□ 0.56
VAT1-205ENST00000587173 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.56
VAT1-205ENST00000587173 ALX1Q15699 326 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 NSMFQ6X4W1 530 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 FAM126BQ8IXS8 530 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 FAM227BQ96M60 508 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.54■□□□□ 0.56
VAT1-205ENST00000587173 CYP39A1Q9NYL5 469 aa18.54■□□□□ 0.56
VAT1-205ENST00000587173 GNEQ9Y223 722 aaKnown RBP18.54■□□□□ 0.56
VAT1-205ENST00000587173 A0A0C4DFX4 3053 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 A0A0D9SFI3 127 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.53■□□□□ 0.56
VAT1-205ENST00000587173 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.53■□□□□ 0.56
VAT1-205ENST00000587173 ICAM1P05362 532 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 FGRP09769 529 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 FOSL2P15408 326 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 MCMDC2Q4G0Z9 681 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 RRP12Q5JTH9 1297 aaKnown RBP18.53■□□□□ 0.56
VAT1-205ENST00000587173 TTBK2Q6IQ55 1244 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 CXCL17Q6UXB2 119 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 EEPD1Q7L9B9 569 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 FBXO16Q8IX29 292 aaPredicted RBP18.53■□□□□ 0.56
VAT1-205ENST00000587173 COL25A1Q9BXS0 654 aaPredicted RBP18.53■□□□□ 0.56
VAT1-205ENST00000587173 PPP1R12CQ9BZL4 782 aa18.53■□□□□ 0.56
VAT1-205ENST00000587173 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 FGAP02671 866 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 CSF2RAP15509 400 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 SMPD1P17405 629 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 PTGS1P23219 599 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 DNAJB2P25686 324 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 SLC16A2P36021 539 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 FSCN1Q16658 493 aaKnown RBP18.52■□□□□ 0.56
VAT1-205ENST00000587173 TMEM199Q8N511 208 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 PURBQ96QR8 312 aaKnown RBP18.52■□□□□ 0.56
VAT1-205ENST00000587173 AP5M1Q9H0R1 490 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 RANBP17Q9H2T7 1088 aaKnown RBP18.52■□□□□ 0.56
VAT1-205ENST00000587173 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.56
VAT1-205ENST00000587173 PDGFCQ9NRA1 345 aa18.52■□□□□ 0.56
VAT1-205ENST00000587173 FRMPD2Q68DX3 1309 aaPredicted RBP18.51■□□□□ 0.55
VAT1-205ENST00000587173 DYNC1LI2O43237 492 aaPredicted RBP18.51■□□□□ 0.55
VAT1-205ENST00000587173 CABYRO75952 493 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 TOP1P11387 765 aaKnown RBP18.51■□□□□ 0.55
VAT1-205ENST00000587173 TMEM240Q5SV17 173 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 SYDE2Q5VT97 1194 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 TAPT1Q6NXT6 567 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 BTNL9Q6UXG8 535 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 C16orf59Q7L2K0 433 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 MCM3APO60318 1980 aa18.51■□□□□ 0.55
VAT1-205ENST00000587173 ZEB2O60315 1214 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 CD4P01730 458 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 HSPD1P10809 573 aaKnown RBP18.5■□□□□ 0.55
VAT1-205ENST00000587173 NMIQ13287 307 aaPredicted RBP18.5■□□□□ 0.55
VAT1-205ENST00000587173 ITGA7Q13683 1181 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
VAT1-205ENST00000587173 SLC43A3Q8NBI5 491 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 RILPL2Q969X0 211 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 VTA1Q9NP79 307 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 GPCPD1Q9NPB8 672 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 TCP11L1Q9NUJ3 509 aa18.5■□□□□ 0.55
VAT1-205ENST00000587173 NFIBO00712 420 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 ACRP10323 421 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 CYP2C18P33260 490 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
VAT1-205ENST00000587173 HAND2P61296 217 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 BAATQ14032 418 aaPredicted RBP18.49■□□□□ 0.55
VAT1-205ENST00000587173 GRIN2CQ14957 1233 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 PSRC1Q6PGN9 363 aaPredicted RBP18.49■□□□□ 0.55
VAT1-205ENST00000587173 KIAA1211Q6ZU35 1233 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 MORC4Q8TE76 937 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 TIFAQ96CG3 184 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 Q9Y3F1 56 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 UNC80Q8N2C7 3258 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 ZMYM6O95789 1325 aa18.49■□□□□ 0.55
VAT1-205ENST00000587173 PTPDC1A2A3K4 754 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 PDHBP11177 359 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 ALDH5A1P51649 535 aaPredicted RBP18.48■□□□□ 0.55
VAT1-205ENST00000587173 B4GALNT3Q6L9W6 998 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 ZNF365Q70YC5 407 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
VAT1-205ENST00000587173 HIPK3Q9H422 1215 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 ZNF576Q9H609 170 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 ADD3Q9UEY8 706 aaKnown RBP18.48■□□□□ 0.55
VAT1-205ENST00000587173 LRRC37A2A6NM11 1700 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 GRIN2DO15399 1336 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 CCDC171Q6TFL3 1326 aa18.48■□□□□ 0.55
VAT1-205ENST00000587173 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
VAT1-205ENST00000587173 PSMC6P62333 389 aa18.47■□□□□ 0.55
VAT1-205ENST00000587173 RASIP1Q5U651 963 aa18.47■□□□□ 0.55
VAT1-205ENST00000587173 PBX4Q9BYU1 374 aa18.47■□□□□ 0.55
VAT1-205ENST00000587173 IL23AQ9NPF7 189 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms