RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 CASP8AP2Q9UKL3 1982 aa9.4□□□□□ -0.9
SMAD4-204ENST00000586253 RAD21O60216 631 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 GNRH1P01148 92 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 BMP3P12645 472 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 FECHP22830 423 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 STAT2P52630 851 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 ANTXR2P58335 489 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-204ENST00000586253 SEC23AQ15436 765 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 IFIT1BQ5T764 474 aaKnown RBP9.39□□□□□ -0.91
SMAD4-204ENST00000586253 ANKRD13CQ8N6S4 541 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 GPRC5AQ8NFJ5 357 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 IGDCC4Q8TDY8 1250 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 TMEM87BQ96K49 555 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 NEK1Q96PY6 1258 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 SLF1Q9BQI6 1058 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 FEM1BQ9UK73 627 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 PPP1R9AQ9ULJ8 1098 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 ADAMTS5Q9UNA0 930 aa9.39□□□□□ -0.91
SMAD4-204ENST00000586253 MGAMO43451 1857 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 IFIT3O14879 490 aaKnown RBP9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PRC1O43663 620 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 DGAT1O75907 488 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 FDX1P10109 184 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PDHBP11177 359 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PSMA5P28066 241 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 ERVK-24P63145 666 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 KIF22Q14807 665 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 WTAPQ15007 396 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 TMEM67Q5HYA8 995 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 GPATCH4Q5T3I0 446 aaKnown RBP9.38□□□□□ -0.91
SMAD4-204ENST00000586253 FAM160B2Q86V87 743 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PARP9Q8IXQ6 854 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 TMTC2Q8N394 836 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PRPF38AQ8NAV1 312 aaKnown RBP9.38□□□□□ -0.91
SMAD4-204ENST00000586253 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 CHURC1Q8WUH1 139 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 NUP88Q99567 741 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-204ENST00000586253 TXNRD2Q9NNW7 524 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 RBPJLQ9UBG7 517 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
SMAD4-204ENST00000586253 TMEM232C9JQI7 657 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 VWA5AO00534 786 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 SH2B2O14492 632 aaPredicted RBP9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ATP2A1O14983 1001 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 NR1I2O75469 434 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CNMDO75829 334 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 OATP04181 439 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 LIFRP42702 1097 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 OAZ1P54368 228 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 FCGRTP55899 365 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ANAPC15P60006 121 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CCNA1P78396 465 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 EXOSC10Q01780 885 aaKnown RBP9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ZNF543Q08ER8 600 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 PKN2Q16513 984 aaKnown RBP9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ZNF697Q5TEC3 545 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 DHX32Q7L7V1 743 aaKnown RBP9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
SMAD4-204ENST00000586253 FBXL16Q8N461 479 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 CD99L2Q8TCZ2 262 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ATG4CQ96DT6 458 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 IL17RAQ96F46 866 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 MAP3K14Q99558 947 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 TM6SF1Q9BZW5 370 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 ZMYND15Q9H091 742 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 LY9Q9HBG7 655 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 FBXO28Q9NVF7 368 aa9.37□□□□□ -0.91
SMAD4-204ENST00000586253 COL11A1P12107 1806 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-204ENST00000586253 DDAH1O94760 285 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 PARP1P09874 1014 aaKnown RBP9.36□□□□□ -0.91
SMAD4-204ENST00000586253 HOXD10P28358 340 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 MAPK4P31152 587 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 COPB2P35606 906 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 PSMC4P43686 418 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 PRMT2P55345 433 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 TROAPQ12815 778 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 PUS10Q3MIT2 529 aaKnown RBP9.36□□□□□ -0.91
SMAD4-204ENST00000586253 BLOC1S2Q6QNY1 142 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 KCTD1Q719H9 257 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 CATIPQ7Z7H3 387 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 SGMS1Q86VZ5 419 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 SHCBP1Q8NEM2 672 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 REPS2Q8NFH8 660 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 TRIM47Q96LD4 638 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 JAKMIP1Q96N16 626 aaKnown RBP9.36□□□□□ -0.91
SMAD4-204ENST00000586253 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 SLC6A16Q9GZN6 736 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 SPATC1LQ9H0A9 340 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms