RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 IQCA1Q86XH1 822 aa20.04■□□□□ 0.8
MBD3-204ENST00000585967 CHMP4CQ96CF2 233 aa20.04■□□□□ 0.8
MBD3-204ENST00000585967 SEZ6LQ9BYH1 1024 aa20.04■□□□□ 0.8
MBD3-204ENST00000585967 UPF3AQ9H1J1 476 aaKnown RBP20.04■□□□□ 0.8
MBD3-204ENST00000585967 RANBP17Q9H2T7 1088 aaKnown RBP20.04■□□□□ 0.8
MBD3-204ENST00000585967 STXBP5LQ9Y2K9 1186 aa20.04■□□□□ 0.8
MBD3-204ENST00000585967 A0A0U1RQG5 324 aaPredicted RBP20.03■□□□□ 0.8
MBD3-204ENST00000585967 ZNF213O14771 459 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 CABYRO75952 493 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 SDSP20132 328 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 HAND2P61296 217 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 CNTN2Q02246 1040 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 NUCB1Q02818 461 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 TNFAIP2Q03169 654 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 FPGSQ05932 587 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 BTNL9Q6UXG8 535 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 ZNF589Q86UQ0 364 aaPredicted RBP20.03■□□□□ 0.8
MBD3-204ENST00000585967 SLC17A8Q8NDX2 589 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 FGD4Q96M96 766 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 TMEM47Q9BQJ4 181 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 AP5M1Q9H0R1 490 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 INCENPQ9NQS7 918 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 CYP39A1Q9NYL5 469 aa20.03■□□□□ 0.8
MBD3-204ENST00000585967 TRIM43BA6NCK2 446 aa20.02■□□□□ 0.8
MBD3-204ENST00000585967 B4DLN1 442 aa20.02■□□□□ 0.8
MBD3-204ENST00000585967 ASGR1P07306 291 aa20.02■□□□□ 0.8
MBD3-204ENST00000585967 MRPL12P52815 198 aaKnown RBP20.02■□□□□ 0.8
MBD3-204ENST00000585967 GPATCH4Q5T3I0 446 aaKnown RBP20.02■□□□□ 0.8
MBD3-204ENST00000585967 TRIM43Q96BQ3 446 aaPredicted RBP20.02■□□□□ 0.8
MBD3-204ENST00000585967 VTA1Q9NP79 307 aa20.02■□□□□ 0.8
MBD3-204ENST00000585967 Q7L0L9 218 aa20.01■□□□□ 0.79
MBD3-204ENST00000585967 TLK2Q86UE8 772 aa20.01■□□□□ 0.79
MBD3-204ENST00000585967 PLEKHM2Q8IWE5 1019 aa20.01■□□□□ 0.79
MBD3-204ENST00000585967 MTMR10Q9NXD2 777 aa20.01■□□□□ 0.79
MBD3-204ENST00000585967 CTNNA3Q9UI47 895 aa20.01■□□□□ 0.79
MBD3-204ENST00000585967 CUL9Q8IWT3 2517 aa20■□□□□ 0.79
MBD3-204ENST00000585967 PDHBP11177 359 aa20■□□□□ 0.79
MBD3-204ENST00000585967 SHHQ15465 462 aa20■□□□□ 0.79
MBD3-204ENST00000585967 IMMTQ16891 758 aaKnown RBP20■□□□□ 0.79
MBD3-204ENST00000585967 CCSAPQ6IQ19 270 aaPredicted RBP20■□□□□ 0.79
MBD3-204ENST00000585967 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
MBD3-204ENST00000585967 SH3RF1Q7Z6J0 888 aa20■□□□□ 0.79
MBD3-204ENST00000585967 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
MBD3-204ENST00000585967 GPCPD1Q9NPB8 672 aa20■□□□□ 0.79
MBD3-204ENST00000585967 Q9Y3F1 56 aa20■□□□□ 0.79
MBD3-204ENST00000585967 FRMPD2Q68DX3 1309 aaPredicted RBP20■□□□□ 0.79
MBD3-204ENST00000585967 WDR19Q8NEZ3 1342 aa20■□□□□ 0.79
MBD3-204ENST00000585967 PTPDC1A2A3K4 754 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 SOWAHBA6NEL2 793 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 SLC16A2P36021 539 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 NKX3-2P78367 333 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 SMAD3P84022 425 aaKnown RBP19.99■□□□□ 0.79
MBD3-204ENST00000585967 MUM1L1Q5H9M0 696 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 IQSEC1Q6DN90 963 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 DGKHQ86XP1 1220 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 KATNBL1Q9H079 304 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 KIAA1217Q5T5P2 1943 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 RAD50Q92878 1312 aa19.99■□□□□ 0.79
MBD3-204ENST00000585967 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 ARVCFO00192 962 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 TIMP1P01033 207 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 SNAP25P60880 206 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 FAAP100Q0VG06 881 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 FSCN1Q16658 493 aaKnown RBP19.98■□□□□ 0.79
MBD3-204ENST00000585967 BRDTQ58F21 947 aaPredicted RBP19.98■□□□□ 0.79
MBD3-204ENST00000585967 RASGRP2Q7LDG7 609 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 DSCC1Q9BVC3 393 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 MAF1Q9H063 256 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 KAT14Q9H8E8 782 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
MBD3-204ENST00000585967 TMEM265A0A087WTH1 108 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 ADCY6O43306 1168 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 PPIGQ13427 754 aaKnown RBP eCLIP19.97■□□□□ 0.794e-9■■□□□ 13.7
MBD3-204ENST00000585967 C9orf50Q5SZB4 431 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 TTBK2Q6IQ55 1244 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 RNF207Q6ZRF8 634 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 TBC1D10CQ8IV04 446 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
MBD3-204ENST00000585967 TMEM199Q8N511 208 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 KRT23Q9C075 422 aa19.97■□□□□ 0.79
MBD3-204ENST00000585967 SNHG28P0DPA3 235 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 ALDH5A1P51649 535 aaPredicted RBP19.96■□□□□ 0.79
MBD3-204ENST00000585967 BAATQ14032 418 aaPredicted RBP19.96■□□□□ 0.79
MBD3-204ENST00000585967 MFSD5Q6N075 450 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 KIAA1211Q6ZU35 1233 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 PNMA1Q8ND90 353 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 TBX21Q9UL17 535 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 GNEQ9Y223 722 aaKnown RBP19.96■□□□□ 0.79
MBD3-204ENST00000585967 NEDD4P46934 1319 aa19.96■□□□□ 0.79
MBD3-204ENST00000585967 KDM4AO75164 1064 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 IGHDP01880 384 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 CPT1AP50416 773 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 CDK7P50613 346 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 PDE4DQ08499 809 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 ASPRV1Q53RT3 343 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 PSRC1Q6PGN9 363 aaPredicted RBP19.95■□□□□ 0.78
MBD3-204ENST00000585967 EEPD1Q7L9B9 569 aa19.95■□□□□ 0.78
MBD3-204ENST00000585967 DNERQ8NFT8 737 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms