RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 NR1I2O75469 434 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
LIG3-203ENST00000585370 PTPREP23469 700 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 TOB1P50616 345 aaPredicted RBP11.87□□□□□ -0.51
LIG3-203ENST00000585370 ICA1Q05084 483 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 TRAF1Q13077 416 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 NR5A1Q13285 461 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 NPY5RQ15761 445 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
LIG3-203ENST00000585370 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 FERMT2Q96AC1 680 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 HOOK2Q96ED9 719 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 ZMYND12Q9H0C1 365 aa11.87□□□□□ -0.51
LIG3-203ENST00000585370 CCDC194A0A1B0GVG4 234 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 GOLGA8HP0CJ92 632 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 CETPP11597 493 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 INPP5BP32019 993 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 ATP2B2Q01814 1243 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 SNW1Q13573 536 aaKnown RBP11.86□□□□□ -0.51
LIG3-203ENST00000585370 SEPT2Q15019 361 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 WWC2Q6AWC2 1192 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 KRT25Q7Z3Z0 450 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 HEATR3Q7Z4Q2 680 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 FMR1NBQ8N0W7 255 aaPredicted RBP11.86□□□□□ -0.51
LIG3-203ENST00000585370 LRRC47Q8N1G4 583 aaKnown RBP11.86□□□□□ -0.51
LIG3-203ENST00000585370 MTMR8Q96EF0 704 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 SH2D4AQ9H788 454 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 FAM13BQ9NYF5 915 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 MTMR7Q9Y216 660 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 SRPRBQ9Y5M8 271 aaKnown RBP11.86□□□□□ -0.51
LIG3-203ENST00000585370 MYH8P13535 1937 aa11.86□□□□□ -0.51
LIG3-203ENST00000585370 M0R2N6 131 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 TLR2O60603 784 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 EN2P19622 333 aaPredicted RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 SLC1A4P43007 532 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 NAPAP54920 295 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 PPIL2Q13356 520 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 ORC2Q13416 577 aaPredicted RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 CCDC96Q2M329 555 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 RESP18Q5W5W9 173 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 DCAF15Q66K64 600 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 SASS6Q6UVJ0 657 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 SHISA4Q96DD7 197 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 PIGSQ96S52 555 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 PYM1Q9BRP8 204 aaKnown RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 FUCA2Q9BTY2 467 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 ZNF341Q9BYN7 854 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 RBSNQ9H1K0 784 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 ZNF112Q9UJU3 913 aa11.85□□□□□ -0.51
LIG3-203ENST00000585370 GREB1LQ9C091 1923 aaPredicted RBP11.85□□□□□ -0.51
LIG3-203ENST00000585370 SMCO2A6NFE2 343 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 F5H6K3 240 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 LAD1O00515 517 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ZBTB5O15062 677 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ZNF202O95125 648 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 GH2P01242 217 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 SYKP43405 635 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 PPATQ06203 517 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 KLRC3Q07444 240 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ARL6IP4Q66PJ3 421 aaKnown RBP11.84□□□□□ -0.51
LIG3-203ENST00000585370 KANK3Q6NY19 840 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 SIAH1Q8IUQ4 282 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ZNF333Q96JL9 665 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 SDF4Q9BRK5 362 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ARHGAP39Q9C0H5 1083 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 GOLPH3LQ9H4A5 285 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 JMJD4Q9H9V9 463 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
LIG3-203ENST00000585370 GPCPD1Q9NPB8 672 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 PCDHB6Q9Y5E3 794 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
LIG3-203ENST00000585370 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 FAM196BA6NMK8 535 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 PLA2G6O60733 806 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 GDF11O95390 407 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 ASNSP08243 561 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 PFKFB1P16118 471 aa11.83□□□□□ -0.52
LIG3-203ENST00000585370 CAP2P40123 477 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms