RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 PCDHA4Q9UN74 947 aa14.85□□□□□ -0.03
TRIM47-202ENST00000585333 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 GRM1Q13255 1194 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 AP3B2Q13367 1082 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 DGKZQ13574 1117 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 PLS1Q14651 629 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 FAM110CQ1W6H9 321 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 SNRNP48Q6IEG0 339 aaKnown RBP14.84□□□□□ -0.03
TRIM47-202ENST00000585333 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 CPXCR1Q8N123 301 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 REXO1Q8N1G1 1221 aaKnown RBP14.84□□□□□ -0.03
TRIM47-202ENST00000585333 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 ACAD9Q9H845 621 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 RIC8AQ9NPQ8 531 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 VPS54Q9P1Q0 977 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 MORF4L1Q9UBU8 362 aa14.84□□□□□ -0.03
TRIM47-202ENST00000585333 ZNF214Q9UL59 606 aaPredicted RBP14.84□□□□□ -0.03
TRIM47-202ENST00000585333 B4DLN1 442 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 PIK3CDO00329 1044 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 CA12O43570 354 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 ZSCAN22P10073 491 aaPredicted RBP14.83□□□□□ -0.04
TRIM47-202ENST00000585333 SLC35G1Q2M3R5 365 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 USH1GQ495M9 461 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 ATL3Q6DD88 541 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 MCTP1Q6DN14 999 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 KRT25Q7Z3Z0 450 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 BLIDQ8IZY5 108 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 FAM43AQ8N2R8 423 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 REPS2Q8NFH8 660 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.04
TRIM47-202ENST00000585333 MPHOSPH6Q99547 160 aaKnown RBP14.83□□□□□ -0.04
TRIM47-202ENST00000585333 NAP1L4Q99733 375 aaKnown RBP14.83□□□□□ -0.04
TRIM47-202ENST00000585333 PAGR1Q9BTK6 254 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
TRIM47-202ENST00000585333 PFASO15067 1338 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 A0A0G2JMZ2 1700 aa14.83□□□□□ -0.04
TRIM47-202ENST00000585333 PARP14Q460N5 1801 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 hCG_1642624A0A1W2PR95 340 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 GCOM1H8Y6P7 765 aaPredicted RBP14.82□□□□□ -0.04
TRIM47-202ENST00000585333 TLR2O60603 784 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 POLR2MP0CAP2 368 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 ALAS1P13196 640 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 MAPK4P31152 587 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 DDIT3P35638 169 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 ERVK-24P63145 666 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 TMEM132BQ14DG7 1078 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM47-202ENST00000585333 DIS3L2Q8IYB7 885 aaKnown RBP14.82□□□□□ -0.04
TRIM47-202ENST00000585333 DNAJC5GQ8N7S2 189 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 TRERF1Q96PN7 1200 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 CFHR5Q9BXR6 569 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 RNF146Q9NTX7 359 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 NOL7Q9UMY1 257 aaKnown RBP14.82□□□□□ -0.04
TRIM47-202ENST00000585333 ZNF536O15090 1300 aa14.82□□□□□ -0.04
TRIM47-202ENST00000585333 CCDC194A0A1B0GVG4 234 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 IGF2BP3O00425 579 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRIM47-202ENST00000585333 STRNO43815 780 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 PPFIA3O75145 1194 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 BRD1O95696 1058 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 U2AF2P26368 475 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRIM47-202ENST00000585333 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 GHRHRQ02643 423 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
TRIM47-202ENST00000585333 COA7Q96BR5 231 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 PTPN18Q99952 460 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 SLC5A4Q9NY91 659 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 MTMR6Q9Y217 621 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 IVNS1ABPQ9Y6Y0 642 aa14.81□□□□□ -0.04
TRIM47-202ENST00000585333 RLFQ13129 1914 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 LOC102724159A0A0B4J2E5 919 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 PPP1R11O60927 126 aaPredicted RBP14.8□□□□□ -0.04
TRIM47-202ENST00000585333 CYP2C8P10632 490 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
TRIM47-202ENST00000585333 KCTD2Q14681 263 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 ARHGEF6Q15052 776 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 PWP2Q15269 919 aaKnown RBP14.8□□□□□ -0.04
TRIM47-202ENST00000585333 RILPL1Q5EBL4 403 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 NOSTRINQ8IVI9 506 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 ABRAQ8N0Z2 381 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 AGBL1Q96MI9 1066 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 ZNF396Q96N95 335 aaPredicted RBP14.8□□□□□ -0.04
TRIM47-202ENST00000585333 AIFM3Q96NN9 605 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
TRIM47-202ENST00000585333 BAZ2BQ9UIF8 2168 aaKnown RBP14.8□□□□□ -0.04
TRIM47-202ENST00000585333 BMP15O95972 392 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 F13A1P00488 732 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 VEGFBP49765 207 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 KIF22Q14807 665 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 NONOQ15233 471 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRIM47-202ENST00000585333 CSPP1Q1MSJ5 1256 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 RNF207Q6ZRF8 634 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 MOV10L1Q9BXT6 1211 aaKnown RBP14.79□□□□□ -0.04
TRIM47-202ENST00000585333 BTBD7Q9P203 1132 aa14.79□□□□□ -0.04
TRIM47-202ENST00000585333 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
TRIM47-202ENST00000585333 CFAP45Q9UL16 551 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms